Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4083g00004 ATGGTAGGAGCCTTCGACGTCGGCGCCGTTCCTTTCAACCCCGACGGATGGGGACCACCGGACGCCGCAGCCGCCGGAAACAACAATAACAACAACCTTCCTGTCAACGTCCCCTTCGCCCCTTTCTCCCGCTCCGACAAGCTGGGTCGGATTGCCGATTGGACCCGCAATTTTAACAATCCGACTCGCCCCAAGAACCCCGCCGATTCGGCCTTCGATTTCACAAACGACGAGTCGTTCCCGGCAAATGCCGACGACGATGCGTCGTTCCGCCTGGTGGACGGTAAGCCACCGCCGCGGCCCAAATTCGGGCCCAAATGGCGGTTCCAGCAACAGCGTCAGCTTCCGCAGCGGCGCGACGAGGAGGTTGAGGCAAAGAAGCGCGAGGCGGAGAAGGAGAGGGCCCGGCGTGACCGGCTCTACCACATGAACCGGTCGAACCCTAACGCGCAACGGCGTGAAGCGGCTGTGTTCAAATCGTCGGTGGATATCCAACCGGAATGGAACATGCACGACCAGATCCCGTTCTCCACCTTCTCGAAGCTCTCATTCAGCGTTCCCGAACCGGAAGACCTTCTTCTCTGTGGTGCTCTCGAGTATTATGACCGTTCCTACGACCGAATCACCCCGAAGAACGAACGGCGACTTGAGAGGTTCAAGAACCGGAACTTCTTCAAAATTACTACCACTGATGACCCTGTGATTCGTAGGCTCGCTAACGAGGATAAAGCTACCGTTTTTGCAACCGACACTATTCTGTCGACTCTGATGTGTGCCCCTAGGTCTGTTTACTCGTGGGATATCGTGGTTCAGCGTGTTGGGAACAAGTTGTTCTTCGATAAGAGAGATGGGTCGCAGTTGGACTTGCTTTCTGTTCATGAGACCTCTCAGGAGCCTTTGCCTGAGGCTAAGGATGATATCAACTCGGCTCATTCTTTGAGCGTTGAGGCAGCTTATATCAATCAGAATTTCTCCCAGCAAGTTTTGATCAGGGATGGGAACAAGGTGACTTTTGATGAGCCTAACCCTTTTGCTAATGAGGGTGAAGAGGTTGCTTCTGTGGCTTATAGGTATAGGAGGTGGAAGCTTGATGATGATATGTATCTTGTTGCGAGATGTGAAGTGCAGAGTGTTGTTGAATTGAACAAGCAGAGGTCTTTCCTTACTTTGAATGCATTGAATGAGTTCGATCCCAAGTATTCGGGTGTTGATTGGAGGCAGAAGTTGGAGACGCAAAGGGGTGCTGTGTTGGCCACTGAGCTCAAGAACAATGCAAATAAGTTGGCTAAATGGACTGCTCAAGCTCTGTTGGCAAGTGCAGATATGATGAAGTTGGGATATGTGTCTAGGATTCATCCTCGTGACCATTTTAATCATGTGATTTTGGCTGTGGTTGGATATAAACCCAGGGACTTTGCGGCCCAGATTAATCTGAACACATCGAATATGTGGGGAATTGTGAAGTCTATTGTGGACTTGTGCATGAAATTGAATGAGGGCAAATATGTTCTTGTGAAGGATCCATCTAAGCCCCAGGTTAGGATTTACGAGGTTCCTGCAGATGCATTTGAAAACGACTATGTTGAGGAGCCTCTTCCTGAAGATGAACAAGTTCAACCTCCAGCAGAGGGAGCGGATGGTGTAGACGCAGCTGCTACCACGAATGACGTGGAAGATAAGCAGATTGATGATCAAGCTTAG 1701 0.5079 MVGAFDVGAVPFNPDGWGPPDAAAAGNNNNNNLPVNVPFAPFSRSDKLGRIADWTRNFNNPTRPKNPADSAFDFTNDESFPANADDDASFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEAKKREAEKERARRDRLYHMNRSNPNAQRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSFSVPEPEDLLLCGALEYYDRSYDRITPKNERRLERFKNRNFFKITTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVVELNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPAEGADGVDAAATTNDVEDKQIDDQA 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4083g00004 566 MobiDBLite consensus disorder prediction 113 135 - -
Gabi4083g00004 566 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 529 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gabi4083g00004 566 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 540 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gabi4083g00004 566 PIRSF Transl_init_eIF3d 1 547 IPR007783 GO:0003743|GO:0005737|GO:0005852
Gabi4083g00004 566 MobiDBLite consensus disorder prediction 56 135 - -
Gabi4083g00004 566 Coils Coil 118 138 - -
Gabi4083g00004 566 MobiDBLite consensus disorder prediction 526 566 - -
Gabi4083g00004 566 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 517 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4083g00004 Gabi-Chr4083 47285 52074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4083g00004 4 564 Eukaryotic Initiation Factors Gene Family AT4G20980 78.767 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4083g00004 K03251 - gmx:100799613 1016.91