Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4081g00081 ATGGCTGCTTTCACTTGCTCCGCCGCAGACCTCCACCCTCTTCTTGGCACCGATGCTAATGCCACAGCCTTTGCTGAATTCATATGTGGACGTTTTGATGCCATTTCAGACAAGTTTGTTGACACAACCTATGCAGTTGATAACACTTACCTTCTCTTCTCTGCGTACCTTGTCTTTGCCATGCAGCTTGGCTTTGCTATGTTATGTGCTGGTTCTGTCCGTGCCAAGAACACCATGAACATCATGCTTACCAATGTCCTTGATGCTGCAACCGGTGGAATTTTCTTTTACATCTTTGGTTTTGCATTGGCTTTTGGTACCCCTTCCAATGGTTTCATTGGGAAACACTTCTTTGGTCTAAATGATTTCCCTTCACAGTCTTTTGACTATGGATTTTTCCTCTATCAATGGGCTTTTGCCATTGCTGCTGCTGGGATTACAAGTGGTTCCATTGCAGAGAGGACACAATTTGTTTCCTATTTGATTTACTCATCATTCTTGACTGGTTTTGTTTATCCCGTTGTGGCTCATTGGTTCTGGTCTGCTGATGGTTGGGGTAGTCCTGCTCGGGCAGAGAATCTGTTGTTTGGATCTGGGGTCATTGATTTTGCTGGTTCAGGTGTTGTTCACTTGGTTGGAGCTGTTGCTGGATTCTGGGGTGCATTCATTGAAGGCCCTCGTATTGGAAGATTTGATCATGGAGGAAAACCTGTGCCAATGAGAGGACACAGTGGTACCTTGGTTGTTTTGGGAACATTCTTGTTGTGGTTTGGATGGTATGGATTCAACCCTGGCTCATTTCTTAACATCTTGAAGACCTATGGAGATAGTGGTTCTTATTATGGACAATGGAGTGCTATTGGGAGGACTGCAGTGACCACAAGTCTTGCTGGATGCTCAGCAGCATTGACCACACTCTTTGGCAAACGTATCCAAACTGGGCATTGGATTGTCACAGATGTTTGCAATGGTTTGCTTGGTGGGTTTGCTGCAATCACTGCAGGGTGTGCTTTTGTGGACCCTTGGGCAGCAATCATATGTGGGTTTGTAGCTGCTTGGGTTCTCATTGGATGCAACTTGCTAGCAGAGAAATTCAAGTATGATGACCCATTGGAGGCTGCACAACTTCATGGTGGTTGTGGCATATGGGGGATTATCTTCACTGCTCTATTTGCTAAGAAACAATATGTAAATGAGGTCTACCCAGGGCTTCCTGATAGGCCTTATGGATTGCTCATGGGAGGGGGTGCAAAGCTCTTGGCAGCACATGTTATGCAGATTTTGGCCATCGTAGGTTGGGTGAGTCTCACCATGGGATTGGTGTTCTTTGTGCTGCACAAACTCAATTTACTGAGGACTTCACCTGATGAGGAGATGGCTGGATTGGACTTAACCAGCCATGGTGGATTGGCATATGAGTATCATGAAGATGAACAACCC 1440 0.4576 MAAFTCSAADLHPLLGTDANATAFAEFICGRFDAISDKFVDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFFYIFGFALAFGTPSNGFIGKHFFGLNDFPSQSFDYGFFLYQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGFVYPVVAHWFWSADGWGSPARAENLLFGSGVIDFAGSGVVHLVGAVAGFWGAFIEGPRIGRFDHGGKPVPMRGHSGTLVVLGTFLLWFGWYGFNPGSFLNILKTYGDSGSYYGQWSAIGRTAVTTSLAGCSAALTTLFGKRIQTGHWIVTDVCNGLLGGFAAITAGCAFVDPWAAIICGFVAAWVLIGCNLLAEKFKYDDPLEAAQLHGGCGIWGIIFTALFAKKQYVNEVYPGLPDRPYGLLMGGGAKLLAAHVMQILAIVGWVSLTMGLVFFVLHKLNLLRTSPDEEMAGLDLTSHGGLAYEYHEDEQP 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4081g00081 480 PANTHER AMMONIUM TRANSPORTER 32 468 - -
Gabi4081g00081 480 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Gabi4081g00081 480 Gene3D Ammonium transporter AmtB like domains 29 480 IPR029020 -
Gabi4081g00081 480 NCBIfam ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gabi4081g00081 480 SUPERFAMILY Ammonium transporter 44 452 - -
Gabi4081g00081 480 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gabi4081g00081 480 FunFam Ammonium transporter 28 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4081g00081 Gabi-Chr4081 753817 757768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4081g00081 2 478 Inorganic Solute Cotransporters AT4G28700 75.519 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4081g00081 K03320 - cave:132166278 858.981