Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4081g00058 ATGGCAGCTACAAACTTAGCCACCCAATTAACAGCACTTGTTGTAGATGACAACATACTCAACAGAAAGATTCATCAAAAGCTGTTGAACAGTGTTGGAGCGAAAACACAGGGAGTGGAAAATGGCAAGGAAGCAGTTGACATTCATTTCATCAATGGACAAAGATTTGACCTAATTTTCATGGACATGGATATGCCTATCATGAATGGCATTGAGGCCACAAAGAAACTTCGCTCAATGGGTATTCGTAGCATGATTATTGGTGTGTCATCACGCTCTACAGAAGCAGAAATACGAACATTTATGGAAGCGGGGCTGGATGACTATCAAGAGAAACCCTTAACCATTGCTAAGCTTAGTTCAATCCTTGATAAGATCAACCACAATCTTACTTGA 396 0.404 MAATNLATQLTALVVDDNILNRKIHQKLLNSVGAKTQGVENGKEAVDIHFINGQRFDLIFMDMDMPIMNGIEATKKLRSMGIRSMIIGVSSRSTEAEIRTFMEAGLDDYQEKPLTIAKLSSILDKINHNLT 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4081g00058 131 SUPERFAMILY CheY-like 10 126 IPR011006 -
Gabi4081g00058 131 CDD REC_hyHK_CKI1_RcsC-like 13 123 - -
Gabi4081g00058 131 Gene3D - 2 130 - -
Gabi4081g00058 131 SMART REC_2 10 123 IPR001789 GO:0000160
Gabi4081g00058 131 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 128 - -
Gabi4081g00058 131 Pfam Response regulator receiver domain 13 123 IPR001789 GO:0000160
Gabi4081g00058 131 ProSiteProfiles Response regulatory domain profile. 11 127 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4081g00058 Gabi-Chr4081 419434 420099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4081g00058 10 123 Response Regulator Gene Family AT3G04280 45.217 3.21e-30 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi4081g00058 Response_reg 5.8e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4081g00058 - - gmx:100794931 194.897