Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4081g00057 ATGGAATCACGTCAGTTAACAGCACTTGTTGTAGATGATGACATGATGGTAAGAATAATTCATCGAAAAATGTTGAACAGTGTTGGAGTGGAAAATGAAGTGGTGGAAAATGGCAAAGAAGCTTTGGACATTCACCGCTCTGGACAAAATTTTGACCTAATTCTCATGGATATGGATATGCCTATTATGAATGGCATTGAGGCGACAAAGAAACTTCGGTCAATGGGGATTCATAGCATGATTGCTGGTGTATCAACACGCTCTGTGGAAGCACAAGTACGAGAATTTATGGAAGCAGGACTAGATGACTACCTAGAGAAGCCCTTGACCATTGCTAAACTTACTTCAATCATTCACAAGATCAACAGTATTTGA 375 0.3973 MESRQLTALVVDDDMMVRIIHRKMLNSVGVENEVVENGKEALDIHRSGQNFDLILMDMDMPIMNGIEATKKLRSMGIHSMIAGVSTRSVEAQVREFMEAGLDDYLEKPLTIAKLTSIIHKINSI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4081g00057 124 CDD REC_hyHK_CKI1_RcsC-like 9 118 - -
Gabi4081g00057 124 Pfam Response regulator receiver domain 9 118 IPR001789 GO:0000160
Gabi4081g00057 124 SUPERFAMILY CheY-like 5 121 IPR011006 -
Gabi4081g00057 124 Gene3D - 1 124 - -
Gabi4081g00057 124 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 122 - -
Gabi4081g00057 124 SMART REC_2 6 118 IPR001789 GO:0000160
Gabi4081g00057 124 ProSiteProfiles Response regulatory domain profile. 7 122 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4081g00057 Gabi-Chr4081 410640 411183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4081g00057 1 118 Response Regulator Gene Family AT3G04280 43.333 1.61e-28 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi4081g00057 Response_reg 2.1e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4081g00057 - - rcu:8262779 166.392