Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4081g00023 ATGGATCACTCTCAAATTATAACTATTGAAGACATTGATATGAGTGGAAGTTTAGTATGTGTAGATGATATTGTTGATTTGGAAAAAGACACTGATGAATTTAAAGAAGATGATCTTAGTGAAATCATGGCAAAAAAAGATGGTGAATGTGAAGAAGATGATCTTAGTGAAATCATGACAAACAAAGATGGTGAATGTGAAGAAGATGGTGGACATGAAATTGTGGGAGATGTTGATACTGAATTAAGCGAGACCCCTATTTTAACTAGAGTTTTTGAGACATCAGAAGAAGCTTATATTTTTTATAATGCTTACGCAAAAGGTAAGGGGTTCGGAATACGTAAGCAATACCATAACAAGAGTACAATTACAAAACAACCTTATAGGTGGAGATATGTGTGCTCAAAGCAAGGTGTCAAGAGACTAGATGTTAAAAGAATTGATGTTGACAATGTTAAAAGGCAAAGGGATACAAGAACTAATTGTTTGGCGATGTTACAAGTAAAGTTACTGGATGGCCTATGGAAAGTGGATAAGTTCAATGATATACACAATCATCCAATGATTAACACTCCAACAAAGGTGAAGAAGTTTCTTTCTCAAAATCCATTAAGACGCTCAGATTTGACAAAATCAATTGTGTCTAAACTTTTTCAAGAGGGTTTAACATCTTCGAAAATCTCAAAGGTTGTGAGTGCTATGAATAAAGAGGTTAATCTTACTCCCGTTCAAATCAACAGTATTATATCTAGCCAGCGAAAGAATAATGTAGGGCGAGAATGTCAGGGCATCATCAAACACTTTCAAAGGAAGTCCATGGTTGATGGAGCTTTTTATTTTGCTATGCATTTCGCAGAAGATGGAACATTAAGAAGCATATTCTGGGCAGATGGTAGGTCAAGAGCTGCATATGCTCATTTTGGTGAAGTCCTTGTCTTTGATGTGACTTACAGAACAAACAAGTTCAAGTTTCCTTTTGCTCCTTTTGTGGGAGTTAATCACCATGGGCAAACAATTTTATTTGCTGCCGCTTTGCTAGAAGATGAAACGGAAGCAATTTTTACATGGTTGTTTGAACAATTTCGGACATGTATGTTTGACAAGTCTCCTGTTGCTATTATCACTGATCAAGATAAAGCCATGGGAAAAGCAATTGCCAAGATATTTCCTGAAGCACGACATCGTTTTTGCGCTTGGCATATAAAGAAACATGTTATGGAGCATAGTCAAGCACTACGCGCACAATTTAAAGATGATTTTGATGTTGACTTCCGTGCATGGTATAAAAGTCGCAACATTGATGAGTTTGAAGGCAAATGGGAAGTATTGAGGACTAAATATGTTATTAAGACAGATAGTTGGCTGGCTAACATGCACGCTTCTCGGCATCATTGGGCAAAGGCATACTTGAAAGATACCTTTTTTGCTGGAATGACCACAAGTGGCCGAAGTGAGAGCATCAATGCATTTTTTGATGGATATGTCAACTCTAATACAATGTTAAATGATTTTGTTATCCAGTATGACAAAGAAATCAAATCTAGGAGGGATGCGGAGGAAGATGAGGATTTCAAAACTAGAAATACAAAAGCAGTTTTGGAGACTAATCATCCTATTGAAGAAATAGCTGGTGAATGGTACACAAGAAAATTATTTGAAATTTTCAAAAAGGAGTGGAAGGCTGCCATACTTGATTATTTTCATGAAAAGATTGCAACGAAGGAAAACCTTATCATGTATCGAGTGGGGTCTCGTGAAGTTGATAAAGAAATGTGGGCAATTGTCGAGTATCATTTGACAGAAAGCTTCACAACTCAATGTTCATGTGCAAAGTTTGAGACTATGGGGATTTTGTGTAAACATATTCTATACATTATGAAGAAGAAACAAATAATGACCCTTCCTGAAAAAATATCTTGTTTAGATGGACTATGA 1935 0.3612 MDHSQIITIEDIDMSGSLVCVDDIVDLEKDTDEFKEDDLSEIMAKKDGECEEDDLSEIMTNKDGECEEDGGHEIVGDVDTELSETPILTRVFETSEEAYIFYNAYAKGKGFGIRKQYHNKSTITKQPYRWRYVCSKQGVKRLDVKRIDVDNVKRQRDTRTNCLAMLQVKLLDGLWKVDKFNDIHNHPMINTPTKVKKFLSQNPLRRSDLTKSIVSKLFQEGLTSSKISKVVSAMNKEVNLTPVQINSIISSQRKNNVGRECQGIIKHFQRKSMVDGAFYFAMHFAEDGTLRSIFWADGRSRAAYAHFGEVLVFDVTYRTNKFKFPFAPFVGVNHHGQTILFAAALLEDETEAIFTWLFEQFRTCMFDKSPVAIITDQDKAMGKAIAKIFPEARHRFCAWHIKKHVMEHSQALRAQFKDDFDVDFRAWYKSRNIDEFEGKWEVLRTKYVIKTDSWLANMHASRHHWAKAYLKDTFFAGMTTSGRSESINAFFDGYVNSNTMLNDFVIQYDKEIKSRRDAEEDEDFKTRNTKAVLETNHPIEEIAGEWYTRKLFEIFKKEWKAAILDYFHEKIATKENLIMYRVGSREVDKEMWAIVEYHLTESFTTQCSCAKFETMGILCKHILYIMKKKQIMTLPEKISCLDGL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4081g00023 644 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 82 637 IPR031052 GO:0006355
Gabi4081g00023 644 Pfam MULE transposase domain 310 403 IPR018289 -
Gabi4081g00023 644 Pfam SWIM zinc finger 604 623 IPR007527 GO:0008270
Gabi4081g00023 644 Pfam FAR1 DNA-binding domain 101 188 IPR004330 -
Gabi4081g00023 644 SMART 26again6 605 632 IPR006564 GO:0008270
Gabi4081g00023 644 ProSiteProfiles Zinc finger SWIM-type profile. 597 630 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4081g00023 Gabi-Chr4081 219770 221704 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi4081g00023 MULE 2.5e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4081g00023 - - ecad:122594423 622.083