Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4081g00012 ATGGACGGTGATAAACAAAAATGGATCATCCGAATGAAGCCATTGATTGCTGTTGTGTTCTTACAGTTTGGACTTGCAGGTATGGATGTTCTATCCAAGGCTGCACTGAACAAGGGAATGAGCAATTATGTTTTCGTCGTTTATCGCCATGCTGTTGCTTTCGTTGTCATAGCACCTTTCGCGGTGATCTTGGACAAGAAAGTAAGGCCAAAGATGACATTTTCAATCTTCATGAAGATAGTGGCGCTCAGCGTACTAGAGCCAGTTATTGACCAGAATTTATATTTTTTGGGAATGAAGTACACAACTGCTACCTTTGCCGTTACCATGTACAATATCCTTCCTGCCATTACCTTCATGATGGCTTGCATACTCAAGCTTGAGAAGATAAAAATGAAAAGTATACGAAGTCAAGCAAAGGTGGCTGGGACTTTAGCCACTGTTGCGGGTGCCATGGTCATGACACTGATAAAAGGCCCAGTACTTGAGCTTTTTGGGAAACACGGAAGCAATAGCCACAACCAGAATAGTGGCGGGGCAAATCTGCAACATGCAATAAAGGGATCAGTGATGATCACAATTGGCTGCTTTAGTGCCGCTTGCTTCATGATTCTCCAAGCTACTACCCTTGAAACCTACCCTGCTGAGCTCTCTCTTACAGCATGGATATGCCTATTGGGAACAATTGAAGGTGGCATAGTGGCCCTGGTTATGGAAAGGGGTAACCCGTCAGTATGGTCTCTGAATTGGGATACAAAACTGCTGGCTGCTGTCTACAGTGGCATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGAGTAGTGATGAAAGTTAGAGGCCCAGTCTTCGTAACAACTTTTAATCCCCTCTGCATGGTCATCGTGGCTATCATGGGCTACTTCTTTCTGGCTGAGCAAATGTACCTTGGCAGGGCTGTATCTTGTGGTGTGGGGTAA 957 0.4483 MDGDKQKWIIRMKPLIAVVFLQFGLAGMDVLSKAALNKGMSNYVFVVYRHAVAFVVIAPFAVILDKKVRPKMTFSIFMKIVALSVLEPVIDQNLYFLGMKYTTATFAVTMYNILPAITFMMACILKLEKIKMKSIRSQAKVAGTLATVAGAMVMTLIKGPVLELFGKHGSNSHNQNSGGANLQHAIKGSVMITIGCFSAACFMILQATTLETYPAELSLTAWICLLGTIEGGIVALVMERGNPSVWSLNWDTKLLAAVYSGIVCSGMAYYIQGVVMKVRGPVFVTTFNPLCMVIVAIMGYFFLAEQMYLGRAVSCGVG 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4081g00012 318 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 317 - -
Gabi4081g00012 318 Pfam EamA-like transporter family 188 315 IPR000620 GO:0016020
Gabi4081g00012 318 Pfam EamA-like transporter family 15 154 IPR000620 GO:0016020
Gabi4081g00012 318 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Gabi4081g00012 318 PANTHER WAT1-RELATED PROTEIN 14 315 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4081g00012 Gabi-Chr4081 129086 131528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4081g00012 5 311 Nodulin-like Gene Family AT2G37460 69.381 1.02e-157 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4081g00012 - - gmx:100777050 526.554