Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4081g00008 ATGGACGGTGATAAACAAAAATGGATCATCCGAATGAAGCCATTGATTGCTGTTGTGTTCTTACAGTTTGGACTTGCAGGTATGGATGTTCTATCCAAGGCTGCACTGAACAAGGGAATGAGCAATTATGTTTTCGTCGTTTATCGCCATGCTGTTGCTTTCGTTGTCATAGCACCTTTCGCGGTGATCTTGGACAAGAAAGTAAGGCCAAAGATGACATTTTCAATCTTCATGAAGATAGTGGCGCTCAGCGTACTAGAGCCAGTTATTGACCAGAATTTATATTTTTTGGGAATGAAGTACACAACTGCTACCTTTGCCGTTACCATGTACAATATCCTTCCTGCCATTACCTTCATGATGGCTTGCATACTCAAGCTTGAGAAGATAAAAATGAAAAGTATACGAAGTCAAGCAAAGGTGGCTGGGACTTTAGCCACTGTTGCGGGTGCCATGGTCATGACACTGATAAAAGGCCCAGTACTTGAGCTTTTTGGGAAACACGGAAGCAATAGCCACAACCAGAATAGTGGCGGGGCAAATCTGCAACATGCAATAAAGGGATCAGTGATGATCACAATTGGCTGCTTTAGTGCCGCTTGCTTCATGATTCTCCAAGCTACTACCCTTGAAACCTACCCTGCTGAGCTCTCTCTTACAGCATGGATATGCCTATTGGGAACAATTGAAGGTGGCATAGTGGCCCTGGTTATGGAAAGGGGTAACCCGTCAGTATGGTCTCTGAATTGGGATACAAAACTGCTGGCTGCTGTCTACAGTGGCATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGAGTAGTGATGAAAGTTAGAGGCCCAGTCTTCGTAACAACTTTTAATCCCCTCTGCATGGTCATCGTGGCTATCATGGGCTACTTCTTTCTGGCTGAGCAAATGTACCTTGGCAGGTTGGTTGGTGCTATTGTCATTATTTTAGGGCTGTATCTTGTGGTGTGGGGTAAAAGCAAAGATTACGACTCACCAAGTCCAACTATTAAAGAAAATATATTGCCGGCTAAGCAAACTGTAGATGAGAGCAACGGCAAAGAGGAGGATTCTAATTACGAGGTCATCACTCTCAATAACTCTGGTGCGGGAAACAAAGATCGAGATGAACAAGTATGA 1149 0.4395 MDGDKQKWIIRMKPLIAVVFLQFGLAGMDVLSKAALNKGMSNYVFVVYRHAVAFVVIAPFAVILDKKVRPKMTFSIFMKIVALSVLEPVIDQNLYFLGMKYTTATFAVTMYNILPAITFMMACILKLEKIKMKSIRSQAKVAGTLATVAGAMVMTLIKGPVLELFGKHGSNSHNQNSGGANLQHAIKGSVMITIGCFSAACFMILQATTLETYPAELSLTAWICLLGTIEGGIVALVMERGNPSVWSLNWDTKLLAAVYSGIVCSGMAYYIQGVVMKVRGPVFVTTFNPLCMVIVAIMGYFFLAEQMYLGRLVGAIVIILGLYLVVWGKSKDYDSPSPTIKENILPAKQTVDESNGKEEDSNYEVITLNNSGAGNKDRDEQV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4081g00008 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 331 - -
Gabi4081g00008 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Gabi4081g00008 382 PANTHER WAT1-RELATED PROTEIN 14 333 IPR030184 GO:0016020|GO:0022857
Gabi4081g00008 382 MobiDBLite consensus disorder prediction 350 382 - -
Gabi4081g00008 382 MobiDBLite consensus disorder prediction 361 376 - -
Gabi4081g00008 382 Pfam EamA-like transporter family 15 154 IPR000620 GO:0016020
Gabi4081g00008 382 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4081g00008 Gabi-Chr4081 128849 131523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4081g00008 5 382 Nodulin-like Gene Family AT2G37460 63.228 1.24e-175 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4081g00008 - - gmx:100777050 622.468