Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4081g00007 ATGGACGGTGATAAACAAAAATGGATCATCCGAATGAAGCCATTGATTGCTGTTGTGTTCTTACAGTTTGGACTTGCAGGTATGGATGTTCTATCCAAGGCTGCACTGAACAAGGGAATGAGCAATTATGTTTTCGTCGTTTATCGCCATGCTGTTGCTTTCGTTGTCATAGCACCTTTCGCGGTGATCTTGGACAAGTATATTAATTTCTCTCTTCCCTCTGTGTGTGTGAAAGTAAGGCCAAAGATGACATTTTCAATCTTCATGAAGATAGTGGCGCTCAGCGTACTAGAGCCAGTTATTGACCAGAATTTATATTTTTTGGGAATGAAGTACACAACTGCTACCTTTGCCGTTACCATGTACAATATCCTTCCTGCCATTACCTTCATGATGGCTTGCATACTCAAGCTTGAGAAGATAAAAATGAAAAGTATACGAAGTCAAGCAAAGGTGGCTGGGACTTTAGCCACTGTTGCGGGTGCCATGGTCATGACACTGATAAAAGGCCCAGTACTTGAGCTTTTTGGGAAACACGGAAGCAATAGCCACAACCAGAATAGTGGCGGGGCAAATCTGCAACATGCAATAAAGGGATCAGTGATGATCACAATTGGCTGCTTTAGTGCCGCTTGCTTCATGATTCTCCAAGCTACTACCCTTGAAACCTACCCTGCTGAGCTCTCTCTTACAGCATGGATATGCCTATTGGGAACAATTGAAGGTGGCATAGTGGCCCTGGTTATGGAAAGGGGTAACCCGTCAGTATGGTCTCTGAATTGGGATACAAAACTGCTGGCTGCTGTCTACAGTGGCATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGAGTAGTGATGAAAGTTAGAGGCCCAGTCTTCGTAACAACTTTTAATCCCCTCTGCATGGTCATCGTGGCTATCATGGGCTACTTCTTTCTGGCTGAGCAAATGTACCTTGGCAGGTTGGTTGGTGCTATTGTCATTATTTTAGGGCTGTATCTTGTGGTGTGGGGTAAAAGCAAAGATTACGACTCACCAAGTCCAACTATTAAAGAAAATATATTGCCGGCTAAGCAAACTGTAGATGAGAGCAACGGCAAAGAGGAGGATTCTAATTACGAGGTCATCACTCTCAATAACTCTGGTGCGGGAAACAAAGATCGAGATGAACAAGTATGA 1182 0.4374 MDGDKQKWIIRMKPLIAVVFLQFGLAGMDVLSKAALNKGMSNYVFVVYRHAVAFVVIAPFAVILDKYINFSLPSVCVKVRPKMTFSIFMKIVALSVLEPVIDQNLYFLGMKYTTATFAVTMYNILPAITFMMACILKLEKIKMKSIRSQAKVAGTLATVAGAMVMTLIKGPVLELFGKHGSNSHNQNSGGANLQHAIKGSVMITIGCFSAACFMILQATTLETYPAELSLTAWICLLGTIEGGIVALVMERGNPSVWSLNWDTKLLAAVYSGIVCSGMAYYIQGVVMKVRGPVFVTTFNPLCMVIVAIMGYFFLAEQMYLGRLVGAIVIILGLYLVVWGKSKDYDSPSPTIKENILPAKQTVDESNGKEEDSNYEVITLNNSGAGNKDRDEQV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4081g00007 393 Pfam EamA-like transporter family 199 337 IPR000620 GO:0016020
Gabi4081g00007 393 Pfam EamA-like transporter family 15 165 IPR000620 GO:0016020
Gabi4081g00007 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 342 - -
Gabi4081g00007 393 MobiDBLite consensus disorder prediction 361 393 - -
Gabi4081g00007 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 167 - -
Gabi4081g00007 393 PANTHER WAT1-RELATED PROTEIN 14 344 IPR030184 GO:0016020|GO:0022857
Gabi4081g00007 393 MobiDBLite consensus disorder prediction 372 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4081g00007 Gabi-Chr4081 128849 131525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4081g00007 5 393 Nodulin-like Gene Family AT2G37460 61.440 6.72e-172 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4081g00007 - - gmx:100777050 613.994