Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4078g00001 ATGTGGAAAAAAGAGGAGGTGAAGCAAGAATGGATGGAGGTGGAGGAGATGGATGTGGTTGATGCTGAGTATGGAAAATGGAACTCAAATCCAAATCTTAAAAGCATAAAGGAGCTAATTTACAAGAAGGGATATGCGAAAATAGATAAGCGAAAAGTTCCTTTGACGGATAATAACATCATTGAGCAGGAATTAGGAAAGTTTGGCATTGTATGCACAGAAGACATGGTGCATCAAATTGATAATGTTGGTCCGCACTTTAAGGAAGTTGTCAAATTTATGTGGCCCTTTGAACTCAACAAGCCAGCTGATGGATTAAAAGGATCAAAAACACTATACAAGGATGGTGGAGACACAGGGAGCCGTGAGGATCTCATCAATGAACTAATCAATAGAATGAATTAA 405 0.3877 MWKKEEVKQEWMEVEEMDVVDAEYGKWNSNPNLKSIKELIYKKGYAKIDKRKVPLTDNNIIEQELGKFGIVCTEDMVHQIDNVGPHFKEVVKFMWPFELNKPADGLKGSKTLYKDGGDTGSREDLINELINRMN 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4078g00001 134 CDD Ribosomal_L7_archeal_euk 31 134 IPR035808 -
Gabi4078g00001 134 Gene3D - 30 129 IPR036919 -
Gabi4078g00001 134 Gene3D - 32 94 - -
Gabi4078g00001 134 SUPERFAMILY Ribosomal protein L30p/L7e 30 134 IPR036919 -
Gabi4078g00001 134 PANTHER 60S RIBOSOMAL PROTEIN L7 30 134 IPR039699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4078g00001 Gabi-Chr4078 4434 6696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4078g00001 31 134 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 57.692 2.65e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4078g00001 K02937 - gmx:100500005 192.2