Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4077g00001 ATGGCTTCTTTGTTGTGCTATTCTCTCTTTTCTCTTGCCTTCATTATCACCTTTCAGCTATTGATACAAAGAAGAAGATTCAAAAACCTTCCACCATTTCCACCAACTCTTCCCATAATCGGCAATCTTCATCACATCAAGCCCCCACTTCACCGTTCCCTTCACAAACTATCACAAAAATGTGGTCATATCTTCTCACTATGGTTTGGTTCACGCATTGTGGTTGTTATCTCCTCCCCAAACTTAGTTCAAGAGTGCTTCACCAAATACGACACCGTTCTCGCAAACCGGCCACATTTCCTCACTGGAAAGTACCTCCTCTACAACAACACCACCTTGGGTGCCTCCTCCTACGGTGACCACTGGCGCAACCTCCGTCGTATCACCGCCACCGATGTCCTCTCAACGCCACGTCTGAACTCATTCTTTGAAATCCGAAGGGTAGAAACCATGAGGGTCATGCAAAAGTTGGCTCAAGACACATGCAAGGGGTTCGCAAAAGTGCAACTTAGACACAGGCTCACGGAGTTGACTTTCAACAACATGATGAGGATGATCTCTGGGAAGAGGTACTATGGCGAGGACATTGACGTGACGGATGCTAAGGAAGCGAAGCAGTTCAGAGAGATCATCTCAGAGATGCTGTCATTGTTGGGTGCAAACAATAAAGGGGATTTCTTGCCATTTCTTCGGTGGTTTGATTTTGATGGTTTGGAGAAGAGGTTGAAGTTGATTAGTAAGAGAGCCGATGCATTCTTGGAAGGACTCCTTCAAGAGCATCGTAGTGGGAAGCACGATGCCAATACCATGATAGAACATCTCTTGACCCTCCAAATATCGCAGCCAGAGTATTACTCGGATTATATCATCAAAGGGCTTATTCAGGGTATGCTACTCGCTGGAACAGACACAACAGCTGTGACTATAGAGTGGGCAATATCTGCTTTGTTGAATCACCCTGAGATATTGAAGAAAGCAAAGGATGAATTGGACAGTTACATAGGGCAAGATCGCTTGGTAGATGAGTCAGATATTCCAAATCTCCCTTACCTTAAAAATATTATCTACGAGACACTTCGATTGTACCCTCCAGGTCCGTTACTATTGCCTCATTTTTCTTCAGATGAGTGCAATATTGGAGGATTTACTATTCCTCGTGAAACTATAGTGTTGATCAATGCATGGACCATTCACAGAGATCCTGAAATTTGGAGTGATGCTACATGTTTTAAGCCAGAGAGATTTGAAAAAGAAGGGGAAGCAAACAAGTTAATTGCATTCGGCTTGGGAAGAAGGGCTTGTCCTGGTTTAGGTTTGGCAAATCGTACGATGGGCTTGACTTTGGGGCTATTGATTCAGTGCTTTGAATGGAAACGACCAACTGATGAAGAAATTGATATGAGGGAGACAAAAGGGGTCGCCATGCCAATGCTAATTCCATTAGAAGCTATGTGTAAACCACGACCAATCAGTAAGAAATTTATGTAG 1488 0.4388 MASLLCYSLFSLAFIITFQLLIQRRRFKNLPPFPPTLPIIGNLHHIKPPLHRSLHKLSQKCGHIFSLWFGSRIVVVISSPNLVQECFTKYDTVLANRPHFLTGKYLLYNNTTLGASSYGDHWRNLRRITATDVLSTPRLNSFFEIRRVETMRVMQKLAQDTCKGFAKVQLRHRLTELTFNNMMRMISGKRYYGEDIDVTDAKEAKQFREIISEMLSLLGANNKGDFLPFLRWFDFDGLEKRLKLISKRADAFLEGLLQEHRSGKHDANTMIEHLLTLQISQPEYYSDYIIKGLIQGMLLAGTDTTAVTIEWAISALLNHPEILKKAKDELDSYIGQDRLVDESDIPNLPYLKNIIYETLRLYPPGPLLLPHFSSDECNIGGFTIPRETIVLINAWTIHRDPEIWSDATCFKPERFEKEGEANKLIAFGLGRRACPGLGLANRTMGLTLGLLIQCFEWKRPTDEEIDMRETKGVAMPMLIPLEAMCKPRPISKKFM 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4077g00001 495 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Gabi4077g00001 495 Pfam Cytochrome P450 31 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 CDD CYP81 62 481 - -
Gabi4077g00001 495 Gene3D Cytochrome P450 19 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 FunFam Cytochrome P450 family protein 21 491 - -
Gabi4077g00001 495 SUPERFAMILY Cytochrome P450 31 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4077g00001 495 PANTHER CYTOCHROME P450 82C3-RELATED 15 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4077g00001 Gabi-Chr4077 6435 8843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4077g00001 9 489 Cytochrome P450 AT4G37370 53.704 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4077g00001 K13260 K22932 gmx:100784120 798.89