Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4071g00034 ATGACCATCTCAATGGCTATGTGCATTCCGACACAACCATTGAAAAATGTTTCTTTAAGTGGCCAAAAATTGAACGTGAGGCAGAAAGAGAAGGTAGTGTTGGTGATGGGAGCCACGGGAACAGGGAAATCAAGGTTGTCCATTGATTTGGCCACATGTTTTCCATCAGAAATCATAAACTCAGACAAAATGCAAGTGTATAAAGGGCTTGACATAGTCACAAACAAAATCACCAAGGAAGAACAACGTGGGGTGCCACACCATTTGTTAGGAACACAGGATCCTAACTCAGAGTTCACAGCCACTGATTTCTGTGACATGGCATCAATTGCCATTGAATCAATCGTGGGTCGTGACCACCTTCCTATAATCGTGGGAGGCTCCAACTCCTATGTTGAGGCACTTGTCGATAGGTTCGGGTCAAGGTACAATTTGTGTTGTCTTTGGGTGGATGTGTCAATTCCTGTTCTTCATCCCTATGTAGCAAAACGGGTTGATCACATGCTTGATAGTGGAATGGTAAATGAATTGAGACCCTTTTTCAATCCCAATGGGGATTATTCAAGGGGTATAAGAAAAGCAATTGGTGTGCCAGAATTTGACTTGTATTTTCGAAGTGAAGCATTCTCAAATGATGAAACCAGACAGAGGTTACTGCAAGAAGCAATAAGTGAAGTCAAGAGGAATACGTGCAAATTGGCATGCAAACAACTGGGGAGGATTCATGGACTCATAAATGTTAAGAGATGGAAAATCCAACGTCTTTGTGCCACGCCCGTGTTTCAAAAGCACGGCCAAGATGCAAATGATGCGTGGAAGAATCTGGTGGCACAACCGAGTGCCATGATAGTTGACCAATTTCTCTACAGTGCTAATGTTGTTTCTGGCCTTAGAGTACCAGCTTTCTAA 909 0.4301 MTISMAMCIPTQPLKNVSLSGQKLNVRQKEKVVLVMGATGTGKSRLSIDLATCFPSEIINSDKMQVYKGLDIVTNKITKEEQRGVPHHLLGTQDPNSEFTATDFCDMASIAIESIVGRDHLPIIVGGSNSYVEALVDRFGSRYNLCCLWVDVSIPVLHPYVAKRVDHMLDSGMVNELRPFFNPNGDYSRGIRKAIGVPEFDLYFRSEAFSNDETRQRLLQEAISEVKRNTCKLACKQLGRIHGLINVKRWKIQRLCATPVFQKHGQDANDAWKNLVAQPSAMIVDQFLYSANVVSGLRVPAF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4071g00034 302 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 29 288 IPR039657 -
Gabi4071g00034 302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 151 IPR027417 -
Gabi4071g00034 302 Gene3D - 29 288 IPR027417 -
Gabi4071g00034 302 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 154 252 - -
Gabi4071g00034 302 FunFam Adenylate isopentenyltransferase 5, chloroplastic 154 252 - -
Gabi4071g00034 302 Pfam IPP transferase 142 238 - -
Gabi4071g00034 302 Pfam IPP transferase 65 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4071g00034 Gabi-Chr4071 325429 326524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4071g00034 140 288 C2H2 Transcription Factor Family AT2G27760 30.114 2.80e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4071g00034 K10760 - gmx:100777757 471.855