Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4069g00041 ATGAAAGTTGAAGTAGAAATCATTTCTAGAGAGGACATTAAGCCTTCTTCTCCCACACCCTCTCACTTAAGAGTCTTCAAACTTTCCCTTTTGGATCAGCTTGTTCCATCTCCATATGCTCCAACAATCCTATTCTATCACAGTGCAACAACTAGCCTTTCTGAAGTTCCAAAGAGGTTACAATTGTTGAAGCAATCTTTATCTGAGACACTAACCAAGTTCTATCCACTTGGTGGCAAGATCAAAGATGACTTATCCATTGAGTGCAATGATGAAGGGGCTAATTTTGTAGAAGCCAAAGTGAAGTGTCCTATTTCTGAATTTCTAGACCAGCCTCAAGTAACCTTATTGCAAAAGTTTCTTCCATGTGAACAAGTTCTTCAAGAATCAAATTCAGGAACCTATGTGACTAACATTCAAGTGAACATCTTTGAATGTGGAGGAATTGCTATTGGCTTATGCATTTCTCACAAGATCGTAGATGGGGCTGCACTAAGCACCTTCCTTAAGGAGTGGACATGCAGGGCTAGGGGTTGCAACCAATTCACCAACCCCAAATTCATAGCATCTTCACTCTTCCCCACAAACAGTTTATGGCTTAGAGACTTGACATTGGACATGTGGGGTTCCTTGTTCAAGCAAGGAAAATGGGTCACTAAGAGGTTTTTGTTCAGAAACTCAGATATAGCCAAAGTCAAAGATCAAATATCAAGCACAGCAAACACTTCCTGTGTTGTGGTGCAAGACCCTACACGTTTGGAGATAGTTTCTGCAATGTTGTGGAAGTCTCTTATGGATGTGTCCAAGGCACAGTTTGGTACCCAAAGGCCTTCTATGTTGACTCATATGGTGAACCTGCGCAGAAGAATTGATGAAGCACTGTGTCCAGAGCATGCTATGGGAAACCTACTTTGGTTAGTAACTGCAGAACACATGAGTGATCATGAGATGGGGTTGGATGAGTTGGTGTGTAAGTTGAGAAATGGAATATCAAAAGTTGATAATGAATTTGTTGAAGAATTGAGAGGTGATAAGGGAAGGTCAATTATGCATGAGACTCTCAAAGCTATAGGTGAGGCAGGACCAAAAAATGAAGTTGAATATCATGGGTTTAGCAGCTGGTGCAATTTTGGGTTCTATGATGCTGATTTTGGGTGGGGAAAGCCCACATGGATGAGTTGTACTGTTGGTTCAAATGGTTCATTGTTTTTTAATCTTATTATCTTGGTTGACACAAGGTTGCAAGATGGCATTGAAGCTTGGGTTACCTTGGATGACCAGGACATGACTCTTTTGCAAGCAAACCCTGAACTCCTCACTTATGCAACCATTGATCCGAGTCCTCTCTCAATGTCAGTTGCCTGA 1365 0.4139 MKVEVEIISREDIKPSSPTPSHLRVFKLSLLDQLVPSPYAPTILFYHSATTSLSEVPKRLQLLKQSLSETLTKFYPLGGKIKDDLSIECNDEGANFVEAKVKCPISEFLDQPQVTLLQKFLPCEQVLQESNSGTYVTNIQVNIFECGGIAIGLCISHKIVDGAALSTFLKEWTCRARGCNQFTNPKFIASSLFPTNSLWLRDLTLDMWGSLFKQGKWVTKRFLFRNSDIAKVKDQISSTANTSCVVVQDPTRLEIVSAMLWKSLMDVSKAQFGTQRPSMLTHMVNLRRRIDEALCPEHAMGNLLWLVTAEHMSDHEMGLDELVCKLRNGISKVDNEFVEELRGDKGRSIMHETLKAIGEAGPKNEVEYHGFSSWCNFGFYDADFGWGKPTWMSCTVGSNGSLFFNLIILVDTRLQDGIEAWVTLDDQDMTLLQANPELLTYATIDPSPLSMSVA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4069g00041 454 PANTHER F21J9.9 6 442 - -
Gabi4069g00041 454 Gene3D - 215 440 IPR023213 -
Gabi4069g00041 454 Gene3D - 1 199 IPR023213 -
Gabi4069g00041 454 Pfam Transferase family 4 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4069g00041 Gabi-Chr4069 557752 559116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4069g00041 3 433 Monolignol Biosynthesis Gene Families AT5G48930 23.465 3.16e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4069g00041 - - gmx:100305374 652.514