Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4069g00038 ATGGCTTTGACCGAGGCTTGTGGTGTGGCTGTGCAATCTATTATAACTGTTGGTGGAATAGGAGGAGTAGCCACTGCTTTCGCAGCTAGAGACATTCTTGGCAATATGTTCAGTGGTTTATCTATGCAGTTTTCAAAGCCCTTTTCAATTGGAGATACAATAAAAGCTGGCTCAATAGAGGGTCAAGTGGTGGAGATGGGTCTTATTACCACTTTATTGCGGACTTCTGAGAAGTTTCCAGTCATTGTGCCACACTCTTTTTTTACTAGCCAGCTTGACCACGGCAGTTTCCTTCGTACTGTTTGGAGCTTGACGACGGCAATGGCATGCGCCTGTGTTATTTGA 345 0.4493 MALTEACGVAVQSIITVGGIGGVATAFAARDILGNMFSGLSMQFSKPFSIGDTIKAGSIEGQVVEMGLITTLLRTSEKFPVIVPHSFFTSQLDHGSFLRTVWSLTTAMACACVI 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4069g00038 114 Gene3D - 47 92 IPR023408 -
Gabi4069g00038 114 SUPERFAMILY Sm-like ribonucleoproteins 31 91 IPR010920 -
Gabi4069g00038 114 Gene3D - 1 46 - -
Gabi4069g00038 114 Pfam Mechanosensitive ion channel 5 90 IPR006685 GO:0016020|GO:0055085
Gabi4069g00038 114 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4069g00038 Gabi-Chr4069 548789 555347 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4069g00038 1 92 Mechanosensitive Ion Channel Family AT4G00290 78.261 9.00e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4069g00038 K22047 - gmx:100789047 155.221