Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4069g00021 ATGCAAGCCCAGAGCTTGCTCCAAAAAACCCTAGCTAGTTCTAGATCCTCACCCTTTTCTATTCTCCCGCCAAAATCCATTTTTGAGCAAAACCCAGATTCTGAATCGGGTTTGAATTCGAAATCCATGGCAGGGTGGTCGCTGTTGGATGACGGGGTTCTCGTTGAAGATAAAGGTGTCGTTGTTGGAGTGTCATACGACAAGACTCGGTGCCGTTTTGGGGTATTCCTTGTTGAGTTCCTGAGGGAGATCTGTCCCCTGAATAGTTCTCTGTCTTTTCCTCCAATGCTAGGTGATGGGCAGCATGTGGATTTGTACAAGCTGTTCATGGTTGTGAAGGGGAAAGGTGGGTACGATGCTGTTTGCGATGGGAAGTTGTGGGATGTGGTTGGGGAGGAATCTGGGTTGGGTGTGAGTGTTGGTTCTTCTGTGAAGCTGGTTTATAGTAAGTACTTGAGTGCTTTGGATGCTTGGATGAAGAAAGTTGCTGACAGTAAGGTACCCTTTGAGCGTAGTTTGGTGGATGATAAGGATAAGTTCGGTAGGCATTTGATGGAGTTGCAAGCCGAGGTGAAAGGGTTGTTGTCGGATTGTGCCACGGAGGATGAGGTCGCCGGAGAGGAGTTCAAGAGTGGATTTGATGATGAATACAAGGATGGGAGGGTGTTGTGTGGTACTAATGGGATGAAGGGTTTGAATCTAGAGTCTAATGGTGACGAAGAAGTGAGGAATGGAGGATGTCCGGATTCAGAAATGCTGGACCACAGGATGAATGAGTCTGTTCTTGGAAACTTATGCGAGGGAAATGATGCAATAGTAGTACTGGATGAGTTTGATGGAGAAAAAATGTCTGTGGAGCCGACAGTGGATGTATCTGATGCGGGGAACAGCAGTATGCCTGGATTGTTGAGTGAAGGCGAGAAGTGTGACGATGATGATGGTGATTTGGTGGTATTGGATCCATCTTCTGGTGATACAGAGAGTACTGGTGGTTGTAAGAGGAAGAGAGAGTCTATGTTGGATTTGCTGAGTTGGATTACTCGTGTTGCTAGGAATCCTTGTGATCCTGTGGTTGGTTCTATACCTGAAAAGCCGAAGTGGAAGTCTTGCAGTAATCAGGAGATCTGGAAGCAGGTTTTGTTGTTTCGAGAGTTTGTGTTTCTCAAAAGGGATTTTGAGGCTACCAGTGAAAATCGTAGTTGGCAGACGCAGAAGATGCATCCGAGCTTGTATGATGATCACCTTGGGGCAACTTATAATCTTAGGGAGAGGTCGAAATGTGACAAGAAGACTTTATTTCCAAAACCTACATCAGCTGTACGAAGCTCTTCAGAGTCATCTGTAGGAACCGGAGTAGATTTCAATAGAACACCAAGTCCTCATACTGAAGATCGTGCTGAGAAACAGTTTCTTCATTCCTCTGATGTACATTCAGGTCTTGATGGATGTGTGAGAGTGATCATTCCTTTGGGTCCAAATCATCAAGCTGAAGTACCAGAATGGACTGGCATGACTTCTGAAAGTGATTCTAAGTGGTTGGGGACCCAAATATGGCCTACAGACAAAGTAAATTCTAGATTTCTTATTGAAAGGGACCCCATGGGAAAGGGAAGACAAGATTCTTGTGGCTGCTCAGTACCAGGTTCTGTTGAGTGTATCAGATTTCACATTAGTGAGAAAAGGTCTAAAGTCAAGCTGGAACTGGGTTTGGCTTTTTTTCAATGGAATTTTGACAAGTCAGGTGAAGACGTTGCGAAATTGTGGAAGGATGAAGATGAGAAAAAATTCAAGGAAGTAGTGCAATCAAACCCTCCATCATCTGAGAGTTATTTTTGGGATCATATTTTTCCATCATTTCCTCATAAGAGCAGGGAAGATTTAGTTAGCTACTACTTCAATGTCTTTCTTTTGCACCGCCGAGGATACCAGAATAGGCATACTCCGGACAACGTTGACAGTGATGATGATGGATCCGAATGTGGGCCATTGAGGAATGTTTTTGGACATCAAACACAGAAATCACGCAGCTCCATCTTATTAACCCCCAAAAAGCCACAGACAAAGGGAAGATAG 2073 0.4452 MQAQSLLQKTLASSRSSPFSILPPKSIFEQNPDSESGLNSKSMAGWSLLDDGVLVEDKGVVVGVSYDKTRCRFGVFLVEFLREICPLNSSLSFPPMLGDGQHVDLYKLFMVVKGKGGYDAVCDGKLWDVVGEESGLGVSVGSSVKLVYSKYLSALDAWMKKVADSKVPFERSLVDDKDKFGRHLMELQAEVKGLLSDCATEDEVAGEEFKSGFDDEYKDGRVLCGTNGMKGLNLESNGDEEVRNGGCPDSEMLDHRMNESVLGNLCEGNDAIVVLDEFDGEKMSVEPTVDVSDAGNSSMPGLLSEGEKCDDDDGDLVVLDPSSGDTESTGGCKRKRESMLDLLSWITRVARNPCDPVVGSIPEKPKWKSCSNQEIWKQVLLFREFVFLKRDFEATSENRSWQTQKMHPSLYDDHLGATYNLRERSKCDKKTLFPKPTSAVRSSSESSVGTGVDFNRTPSPHTEDRAEKQFLHSSDVHSGLDGCVRVIIPLGPNHQAEVPEWTGMTSESDSKWLGTQIWPTDKVNSRFLIERDPMGKGRQDSCGCSVPGSVECIRFHISEKRSKVKLELGLAFFQWNFDKSGEDVAKLWKDEDEKKFKEVVQSNPPSSESYFWDHIFPSFPHKSREDLVSYYFNVFLLHRRGYQNRHTPDNVDSDDDGSECGPLRNVFGHQTQKSRSSILLTPKKPQTKGR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4069g00021 690 MobiDBLite consensus disorder prediction 666 690 - -
Gabi4069g00021 690 Gene3D - 63 168 IPR036431 GO:0003677
Gabi4069g00021 690 MobiDBLite consensus disorder prediction 436 457 - -
Gabi4069g00021 690 SUPERFAMILY ARID-like 71 166 IPR036431 GO:0003677
Gabi4069g00021 690 SMART ELM2_2 488 539 IPR000949 -
Gabi4069g00021 690 SMART bright_3 68 161 IPR001606 GO:0003677
Gabi4069g00021 690 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 67 687 - -
Gabi4069g00021 690 CDD ARID 77 156 - -
Gabi4069g00021 690 CDD SANT 588 635 IPR001005 -
Gabi4069g00021 690 ProSiteProfiles ARID domain profile. 67 160 IPR001606 GO:0003677
Gabi4069g00021 690 SMART ARID_2 64 156 - -
Gabi4069g00021 690 MobiDBLite consensus disorder prediction 432 464 - -
Gabi4069g00021 690 Pfam ARID/BRIGHT DNA binding domain 88 154 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4069g00021 Gabi-Chr4069 311288 316254 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Gabi4069g00021 ARID 2.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4069g00021 - - gsj:114390964 762.681