Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4067g00036 ATGGCGAAAAAGGCTAAAGGGTCTCTCTCCGCTTCTTCTGCCTCTGCTACTGCTAAACGCTCCACGAGACCCTCTGCCTCTGCGTCTTCTGGCAAACTAGTGTTGAGGATTAAATCAAATGAGGCAATGAAGAGACCGGTGCGGCAGATTGATTCAAGAAAGAAACCCAAAGCAAAGAAAAAGAAGAACAAACAAAAGATTGATGCTAAGAAGCCAAAGAAACCTCCAACTGCTTTCTTCTACTTCTTGGAGGATTTTCGTAAAGAATTTCAAGGGCTGAATCCAGATGTAAAGTCAATGCGGGATATTGGCAAGGCATGTGGAGAGAAGTGGAAAACAATGACATATGAGGAGAAGGTTCAATACTATGATATAGCAACAGAAAAACGTGCAGAATTTGATAGAGCAATGGCAGAATACAACAAGAAAATGGAAAGCGGTGAATATGAAGAAACTGATGAGGAATCAGAGTTTGATGAGTAA 483 0.4141 MAKKAKGSLSASSASATAKRSTRPSASASSGKLVLRIKSNEAMKRPVRQIDSRKKPKAKKKKNKQKIDAKKPKKPPTAFFYFLEDFRKEFQGLNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMAEYNKKMESGEYEETDEESEFDE 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4067g00036 160 Pfam HMG (high mobility group) box 72 141 IPR009071 -
Gabi4067g00036 160 SUPERFAMILY HMG-box 58 150 IPR036910 -
Gabi4067g00036 160 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 72 141 IPR009071 -
Gabi4067g00036 160 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 41 157 IPR031061 -
Gabi4067g00036 160 Gene3D High mobility group box domain 66 156 IPR036910 -
Gabi4067g00036 160 SMART hmgende2 71 142 IPR009071 -
Gabi4067g00036 160 MobiDBLite consensus disorder prediction 1 73 - -
Gabi4067g00036 160 MobiDBLite consensus disorder prediction 50 69 - -
Gabi4067g00036 160 MobiDBLite consensus disorder prediction 8 34 - -
Gabi4067g00036 160 CDD HMG-box_AtHMGB1-like 73 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4067g00036 Gabi-Chr4067 478096 484800 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gabi4067g00036 HMG_box 6.2e-18 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4067g00036 - - vum:124844238 181.8