Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4067g00025 ATGTCTGATGAACATAAAAAACTTTACTACCAAGACCTTGTCCTAGATCATAATCAGCAAGCCGTTGGAGGATCTACCATGTACTGTGAAAAGCACTTTTCTTCCTTTCCTGGAGGTTCATTATCTGCTTATGATTCACAATCCTTTGATCCATCTTGTATGAGCTTCACTGAATGTTTACAAGGAGGCATGGACTACAATTCACTTGCAACTTCTTTTGGCTTGTCTCCTTCTTCATCAGAGGTATTTTCATCTATTGAAGGAAATCAAAAGCCAGCACTAGAAACTGGAGATGTAGGTGGTGGTGGTGGTGGTGGTAGTGAAACCCTTGCTACCCTTAACTCATCTATATCTTCCTCATCCTCTGAGGCTGGGGCTGAAGAAGATTCAGGAAAGAGTAAGAAAGATAGCCAGGTGAAAGGAGAAGAAGAAGGAGAAAGATCTAAGAAAAGGAACAAGGATAAGAAGAAAAGAGAGAAAAAGGATAAGGAGCCAAGGTTTGCTTTCATGACTAAGAGTGAAGTTGATCACTTAGAAGATGGATATAGATGGAGAAAATATGGACAAAAAGCTGTCAAAAATAGCCCTTACCCAAGGAGCTACTACAGGTGCACTACACAGAAGTGTACAGTGAAGAAACGCGTGGAGAGGTCATTTCAAGATCCAACCACTGTGATAACAACATATGAAGGTCAACACAATCATCCGGTCCCCACATCTCTTAGAGGGAATGCTGCAGTTGGAATGTTCACACCTATGTTGACAACAACACCGACTCCACTCTCAGCTGGATCAAACTTCCCACAAGATCTGTTTCTTCAGATGCATCCTCACCACAGTTTCATCATCAACAACAACAACAACAACATCCAATCTTCAAACACTAGTGCTAATTCTGGCTCTATTTATTCGCACAACAACATTAACAACTCTCTTCTTCAGCAGTATCATCATCAGCTTCCTCCTGAGTACGGCCTCCTTCAAGACATTGTCCCTTCCATGTTCCTTAACAAGAGCCACCACAATTGA 1029 0.4169 MSDEHKKLYYQDLVLDHNQQAVGGSTMYCEKHFSSFPGGSLSAYDSQSFDPSCMSFTECLQGGMDYNSLATSFGLSPSSSEVFSSIEGNQKPALETGDVGGGGGGGSETLATLNSSISSSSSEAGAEEDSGKSKKDSQVKGEEEGERSKKRNKDKKKREKKDKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNAAVGMFTPMLTTTPTPLSAGSNFPQDLFLQMHPHHSFIINNNNNNIQSSNTSANSGSIYSHNNINNSLLQQYHHQLPPEYGLLQDIVPSMFLNKSHHN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4067g00025 342 ProSiteProfiles WRKY domain profile. 173 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4067g00025 342 MobiDBLite consensus disorder prediction 108 126 - -
Gabi4067g00025 342 SMART WRKY_cls 178 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4067g00025 342 MobiDBLite consensus disorder prediction 127 150 - -
Gabi4067g00025 342 Pfam WRKY DNA -binding domain 179 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4067g00025 342 MobiDBLite consensus disorder prediction 91 168 - -
Gabi4067g00025 342 FunFam WRKY transcription factor 57 164 238 - -
Gabi4067g00025 342 Gene3D WRKY domain 163 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4067g00025 342 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 97 298 IPR044810 GO:0003700
Gabi4067g00025 342 SUPERFAMILY WRKY DNA-binding domain 170 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4067g00025 Gabi-Chr4067 331429 333315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4067g00025 49 338 WRKY Transcription Factor Family AT4G18170 50.512 7.53e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi4067g00025 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4067g00025 - - gmx:100787050 423.705