Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4067g00024 ATGACCCAATCGGAAAAGGAGCCTCTGCTCCCATATTTCAGCCCCAGAAAGATGCCTCCTACGCCATTGCATTCTCAGCTTTTTCCATTGCCAGAGAATGATGAGATTCATCTTCCTGTTACCCCTTCTAATTTCAAGGATCGATTAATATTTGGTCCTTCTTCTGCTTCCCCGAATGACCCTTCTTCACCTTTGGTTGATGCCTTAACACTTTCCCTTAATTCCTCAATACCCTCTTGTTCTTCTTCTTCTTCACAAGACTTTGCATCACCACTCTTAGATTCCCAACAACAACAACATTCCTCTTGGCTCATTGACCCCAATTATCCATGGCACAAAAAGAACCTCCATCGCTCCAAAACTGCACCTGCTATGGCTGTGATCAGCGATTTCAATCCCCAATCCCCTGAGCGAAGACCCCAATTTGTTAGCCAATCTATTATTCATCAGGCTGTTATTCTTCTTGTTATTTATTTGTCATTGGGGGTGGTCATTTATTGGTTCAATCGTCATAATTTTACAGCAATTGAGACTCATCCTATAGTGGATGCATTGTATTTTTGTATAGTTACAATGTGTACAATAGGCTATGGTGATATTACTCCAAATAGTACAGCCACGAAGCTTTTCTCTATATTGTTTGTGTTAGTGGGTTTTGGTTTCATAGACATATTGCTCAGTGGGATGGTTAGTTATGTTCTTGATTTGCAGGAGAATCATTTGTTGAGGACAGTGAAGAGTAGGGGAGAGAAGGATGGGAAGTCATATATAATTGATGTGAAGAAAGGGAGGATGAGGATTAGGATGAAGGTCGCACTGGCTTTGGGTGTTGTGGTACTTTGTATTGGAGTTGGTGTGGGGGTTATGCATTTTGTGGAAAGGCTTGGATGGATAGATTCTTTTTATCTTTCTGTTATGTCTGTTACAACTGTTGGGTATGGAGACCATGCATTCAAGACCTTGCATGGTCGTATCTTTGCTGCAATTTGGTTGCTTGTGTCGACGCTTGCTGTGGCACGAGCATTCCTCTTTTTGGCTGAGGCAAGAGTGGATAAGCGGCATAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCAGACATAGACAATAATGGCTTTGTGAGTAAATCAGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTAACTGAGAAGGATATCATGCAGATTAGTGAGAAGTTTGATAGACTAGATTCCGGCAACTGCGGAAAAATAACACTTGCTGATCTCATGGAGGGTCGGTAA 1293 0.4176 MTQSEKEPLLPYFSPRKMPPTPLHSQLFPLPENDEIHLPVTPSNFKDRLIFGPSSASPNDPSSPLVDALTLSLNSSIPSCSSSSSQDFASPLLDSQQQQHSSWLIDPNYPWHKKNLHRSKTAPAMAVISDFNPQSPERRPQFVSQSIIHQAVILLVIYLSLGVVIYWFNRHNFTAIETHPIVDALYFCIVTMCTIGYGDITPNSTATKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHLLRTVKSRGEKDGKSYIIDVKKGRMRIRMKVALALGVVVLCIGVGVGVMHFVERLGWIDSFYLSVMSVTTVGYGDHAFKTLHGRIFAAIWLLVSTLAVARAFLFLAEARVDKRHRRMAKWILGQDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDIMQISEKFDRLDSGNCGKITLADLMEGR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4067g00024 430 SUPERFAMILY Voltage-gated potassium channels 144 233 - -
Gabi4067g00024 430 FunFam Two-pore potassium channel 5 136 246 - -
Gabi4067g00024 430 PRINTS Two pore domain K+ channel signature 190 218 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gabi4067g00024 430 PRINTS Two pore domain K+ channel signature 309 318 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gabi4067g00024 430 SUPERFAMILY EF-hand 367 427 IPR011992 -
Gabi4067g00024 430 SUPERFAMILY Voltage-gated potassium channels 261 367 - -
Gabi4067g00024 430 Gene3D - 341 429 - -
Gabi4067g00024 430 Gene3D - 276 340 - -
Gabi4067g00024 430 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 152 405 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gabi4067g00024 430 MobiDBLite consensus disorder prediction 1 26 - -
Gabi4067g00024 430 Gene3D - 144 246 - -
Gabi4067g00024 430 FunFam Two-pore potassium channel 3 254 368 - -
Gabi4067g00024 430 ProSitePatterns EF-hand calcium-binding domain. 375 387 IPR018247 -
Gabi4067g00024 430 Pfam Ion channel 153 233 IPR013099 -
Gabi4067g00024 430 Pfam Ion channel 277 344 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4067g00024 Gabi-Chr4067 273426 286723 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4067g00024 1 429 Ion Channels AT4G18160 62.302 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4067g00024 K05389 - gmx:100804249 670.233