Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4067g00006 ATGTATCTTGGAAATAATCCACTTGCTGGTTCCATACCATCAACAATCTTCAACAACTCAATGCTGCAAGATATTGAACTTGGCTCGAGTAATTTATCTGGCAGTCTTCCATCAAATCTATGCCGTGAACTTCCAAAAATCCAAGTACTTTATCTAAGTTTCAACCAGTTATCAGGTAAAATGCCATCTGTTTGGCATCATTGCAAAGAATTGACAGATGTAGACTTATCAAATAATAGGTTCAGCAGAGGAAGCATACCTGCTGATATTGGAAACTTAACTACGCTTGGCTCCTTATATCTTCATGAGGACAACTTGGAAGGAGAAATTCCATCATCTCTTTTTAACATATCTTCACTGAGAGTACTCAGCCTTCAAGAAAATAAGTTGAACGGTAGCCTAACAGAAGAGATGTTTCATCAGCTTCCTTTACTAGAGGTCTTTTCTTTGGCTGATAATCAATTTGTGGGAAGCATTCCAAAATCTATTAGCAATTGTACGATGCTTCAAGAACTATATTTGAGTGACAACTCTTTCGCAGGTTCTATACCCGAGGAGATTGGTGATCTTCCTATACTTGGGACTCTAAGTTTGGGAAATAACCAATTAAGTGGATCTATTCCCTCGAGTATCTTTAACATGTCATCACTGAGTTACATGTCTCTGGCAAATAATTCCCTCTCAGGATTTCTTCCATTGCATATCAACCTAGAAGACTTGGAAGAACTAAACTTGTCTGAAAACCAACTTGGTGGAAAAATTCCAAGCAGCATCTCCAATGCGTCTAAGCTTAATTATGTGGATTTGAGTGTGAATAAGTTCAATGGAGTTATCCCAAATGCTCTTGGGAATTTGGGAGACCTTCAGTGGCTTGAAGTAGCATACAATAATTTAACTACTGATGCTTCCACTATTGAATTAAGCTTCCTTAGTTCTTTGAATTTTCTTCAAATATCAGGGAATCCAATGCATGGAAACCTTCACAAATCAATTGGAAATATGTCCAATTTGGAACAGTTCATTGCAGATGCTTGCAGCATTGATGGTAAAATCCCATTGGAAATTGGAAATTTAAGCAACCTGTTTATACTAAGTTTGTACCAGAATGATTTAAGTGGACCAATTCCAACAACAATCAAGGGTTTGCATTCTCTTCAATATTTGAGTCTTGGAAACAACCAACTACAGGGAACCATCATTGATGAACTTTGTGTAATCAACCGGCTGAGTGAGTTGTATATAACTGAAAATAAGCTAATTTCTGGTGTGATCCCAGCATGCTTTGGTAATCTTACTTCTCTAAGAAAGCTTTACTTGAACTCTAACAAACTGAATCATGTGCCCTCGTCCCTTTGGAGTCTCAAAGACATTCTAGAGGTGAATTTATCCGACAATGCTTTAACTGCATTTCTTCCACTTGATATTGGGAACTTAAAGGCTGTTATATTGTTGGATATATCAAAGAATCAGATTTCAGGAAGCATTCCTACTGCCATTGCTGGATTGCAAAATTTGCAAACACTCAACTTGGCACATAATAAATTGCAAGGGAACATTCCTGATTCAGTTGGCAGTTTGATAAGTTTGATATCCTTGGACTTATCCCAAAACTATTTGTTTGGCATGATTCCAAAATCCTTGGAGTCACTTCATGATCTCAAGTTTATAAATCTTTCTTATAATAGGTTAGAAGGTGAGATTCCCAACGGTGGACCTTTTACAACTTTCACAGCTCAATCTTTCATATTTAATAAAGCACTTTGTGGAAATGCACAACTACAAGTCCCACCATGCAGGAAAATGAAGAGGAAAAGGTCAAATGCAAATCTGTTTTTCATCAAATGCATATTGCCTATAATGTTGTCAACCATTTTGGTTGTTTTATTTGTGTTCCTTCTAATTAGGCGTCAAAGAAAGAATGATGGTGATCCTTCTGAAGTAAGTTCATCAATTTTACCAGCAACAAGAATGATTTCCTATAATGAACTTTCACAAGCAACCAATGGATTTGATGAGTGTAATTTACTTGGTAAGGGAAGCTTTGGTTCAGTGTTCAAAGGTATACTTCCAAATGGGATGGTTGTTGCAGTCAAATTATTTAATCTGGACTTGGAATTAGAATCAAAGAGCTTTCATGCAGAATGTGAAGCAATGCGCAATCTGCGTCATCGAAATCTCATCAAGATCATCACTAGTTGTTCAAATTTTGATTACAAGCTTTTAGTAATGGAATTCATTCCCAATGGGAGCCTTGAAAGATGGTTGTATTCTCATAACTATTGTTTAGGCTTCTTGCAAAGGCTAAATATAATGATAGATGTGGCATCTGCATTGGATTATCTGCATCATGGTTCTTCGCCAACTGTGGTTCATTGTGATGTAAAGCCTAGTAATGTCTTATTGGATGAAAACATGGTTGCCCATGTTAGTGACTTTGGTATTGCCAAACTCCTAGATGAAGGACAATCTAAAGAATATACCAACACCATGGCTACAATCGGCTACATTGCACCAGAGTATGGATCCAAGGGGACTATCTCTACTAAAGGAGATGTATATAGTTTTGGGATTATGTTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGAGTTGTTTGTTGCTGGTTTGAGCATGAAAGGATGGATTAGTGAATCATCACCCCATGCAATTACCCAATTTGTGGATTCCAATTTGTTACAGGATGAACGTATTGATGATATAACAGCATCTGTATCATCTATTTTTAGAATGGCCTTGAATTGTTGTGCAGATTTACCTGAAGAACGAATGAATATGACAGATGTTGCTGCATCATTAAACAAAATCAAGTTCATGTTTCTGAAAATTAATGACTAG 2859 0.368 MYLGNNPLAGSIPSTIFNNSMLQDIELGSSNLSGSLPSNLCRELPKIQVLYLSFNQLSGKMPSVWHHCKELTDVDLSNNRFSRGSIPADIGNLTTLGSLYLHEDNLEGEIPSSLFNISSLRVLSLQENKLNGSLTEEMFHQLPLLEVFSLADNQFVGSIPKSISNCTMLQELYLSDNSFAGSIPEEIGDLPILGTLSLGNNQLSGSIPSSIFNMSSLSYMSLANNSLSGFLPLHINLEDLEELNLSENQLGGKIPSSISNASKLNYVDLSVNKFNGVIPNALGNLGDLQWLEVAYNNLTTDASTIELSFLSSLNFLQISGNPMHGNLHKSIGNMSNLEQFIADACSIDGKIPLEIGNLSNLFILSLYQNDLSGPIPTTIKGLHSLQYLSLGNNQLQGTIIDELCVINRLSELYITENKLISGVIPACFGNLTSLRKLYLNSNKLNHVPSSLWSLKDILEVNLSDNALTAFLPLDIGNLKAVILLDISKNQISGSIPTAIAGLQNLQTLNLAHNKLQGNIPDSVGSLISLISLDLSQNYLFGMIPKSLESLHDLKFINLSYNRLEGEIPNGGPFTTFTAQSFIFNKALCGNAQLQVPPCRKMKRKRSNANLFFIKCILPIMLSTILVVLFVFLLIRRQRKNDGDPSEVSSSILPATRMISYNELSQATNGFDECNLLGKGSFGSVFKGILPNGMVVAVKLFNLDLELESKSFHAECEAMRNLRHRNLIKIITSCSNFDYKLLVMEFIPNGSLERWLYSHNYCLGFLQRLNIMIDVASALDYLHHGSSPTVVHCDVKPSNVLLDENMVAHVSDFGIAKLLDEGQSKEYTNTMATIGYIAPEYGSKGTISTKGDVYSFGIMLMETFTRKKPTDELFVAGLSMKGWISESSPHAITQFVDSNLLQDERIDDITASVSSIFRMALNCCADLPEERMNMTDVAASLNKIKFMFLKIND 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4067g00006 952 PANTHER LEUCINE RICH REPEAT KINASE 2 308 944 - -
Gabi4067g00006 952 ProSiteProfiles Protein kinase domain profile. 670 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4067g00006 952 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 190 - -
Gabi4067g00006 952 Pfam Leucine rich repeat 477 515 IPR001611 GO:0005515
Gabi4067g00006 952 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Gabi4067g00006 952 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Gabi4067g00006 952 FunFam Serine-threonine protein kinase plant-type 651 745 - -
Gabi4067g00006 952 Pfam Protein kinase domain 672 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4067g00006 952 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 217 302 - -
Gabi4067g00006 952 Pfam Leucine Rich Repeat 240 260 IPR001611 GO:0005515
Gabi4067g00006 952 Pfam Leucine Rich Repeat 528 550 IPR001611 GO:0005515
Gabi4067g00006 952 ProSitePatterns Protein kinases ATP-binding region signature. 676 698 IPR017441 GO:0005524
Gabi4067g00006 952 Gene3D Transferase(Phosphotransferase) domain 1 746 948 - -
Gabi4067g00006 952 Gene3D Ribonuclease Inhibitor 305 607 IPR032675 -
Gabi4067g00006 952 ProSiteProfiles Leucine-rich repeat profile. 504 526 IPR001611 GO:0005515
Gabi4067g00006 952 Gene3D Phosphorylase Kinase; domain 1 634 745 - -
Gabi4067g00006 952 SMART LRR_typ_2 431 454 IPR003591 -
Gabi4067g00006 952 SMART LRR_typ_2 142 166 IPR003591 -
Gabi4067g00006 952 SMART LRR_typ_2 117 141 IPR003591 -
Gabi4067g00006 952 SMART LRR_typ_2 44 67 IPR003591 -
Gabi4067g00006 952 SMART LRR_typ_2 237 261 IPR003591 -
Gabi4067g00006 952 SMART LRR_typ_2 190 214 IPR003591 -
Gabi4067g00006 952 SMART LRR_typ_2 502 526 IPR003591 -
Gabi4067g00006 952 SMART LRR_typ_2 382 407 IPR003591 -
Gabi4067g00006 952 SUPERFAMILY RNI-like 236 569 - -
Gabi4067g00006 952 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 746 951 - -
Gabi4067g00006 952 SUPERFAMILY RNI-like 3 324 - -
Gabi4067g00006 952 Gene3D Ribonuclease Inhibitor 1 143 IPR032675 -
Gabi4067g00006 952 Gene3D Ribonuclease Inhibitor 144 304 IPR032675 -
Gabi4067g00006 952 SUPERFAMILY Protein kinase-like (PK-like) 644 945 IPR011009 -
Gabi4067g00006 952 SMART serkin_6 670 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4067g00006 952 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 306 602 - -
Gabi4067g00006 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4067g00006 Gabi-Chr4067 97050 107785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4067g00006 42 949 Receptor kinase-like Gene Family AT3G47570 36.853 2.98e-172 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gabi4067g00006 Pkinase 3.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4067g00006 - K13420 gmx:100784397 1490.71