Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4058g00003 ATGTCTTTTCTACCATCATCAGTTCTAAAGCAATTGCTTTATGAGCTAAACTCAACACTTTACTTAACTGCTTTCTTCTGCCTCATAAGCCTCGTGTTTATGCTTAAGCTGAGAAGAAGAAACAAATCCAATTTGCCACCATCCCCACCAAAGCTACCCATTATTGGTCATATTCACCAACTAGGCACACTCCCACACCACTCCTTCCAAGCACTCTCTCACAAATATGGCCCTATCATGATGCTGCAGCTTGGCCAAATTCCAGCTCTTGTGGTTTCATCAGTAGATGTGGTCAAAGAAATATTCCAAAATCATGATACTGCTTTCTCCAACAGGCCCCAAACCACAGCTGAGAAAATCATCATGTATGGATGCAAGGACGTGGCTTTTGCACCCTACGGCGAAGAGTGGAGACAGAAAAGGAAGATCTGTGTTCTTGAACTTCTAAGCCTTAAAAGAGTGAGATCCTTTCGATCCATTCGAGAAGAAGAAGTTGCACAGTTGGTTGATATGGCACGTGAAGCATGCGAAAGAAAAAGGTCTTCTGTGAATCTGAGTGAGATGTTGATAGTAGCCTCAAACAACATAGTGTCTAGATGTGTTCTTGGACAAAAGTATGATAATCCAGATGGTAGTAGCAGCTTTGGAGAGCTAGGAAGGAAGATGATGGAACACTTAGCAGCTCTCAGTGTGGGAGATTTCTTTCCTTCATTAGGTTGGATCGACGTTCTTACAGGCAAAATACCAGAATTTAAATCCACTTTCCGTGCATTAGATGCTTTCTTCGATCGGGTAATTGAAGAACACAAGAGAATGAAGAGGGACGAAGGCCAATCCGATGATAAAGACTTCGTAGAGATACTCCTTCAAATTCAAGAGGGTGGAAAACATGATTTTCAGCTCACCCATGATGACGTCAAAGCATTTCTAATGGATATATTTGCTGGAGGAAGCGATACTACTTCAACACTTCTGGAATGGACATTTGCGGAGCTCATGAGGAATCCAAATGCCATGAAGAAAGCCCAAGAAGAAGTAAGAAGAGTTGTCGGGTACAAATCACAAGTAGATGAAAATGATGTGAATCAAATGAATTACTTGAAATGTGTTGTAAAAGAAACTTTAAGATTGCGTCCACCTGCTCCTCTTCTGATACCTCGAGAAACTCTGTCTGATGTCAAAGTAAAAGGGTTTGATATTCCGTCCAAAACAAGAGTATTTGTGAATGCATGGGCAATTCAGAGGGACCCTAAAATTTGGAATAGGCCTGAAGAGTTCCTTCCTGAGAGATTTGAAGAACAGCCAGAAGTTAATTTCAAAGGGCAAGATTTGCAACTAATCCCCTTTGGAACTGGTAGAAGAGGATGTCCTGGAATTTCATTTGGGGTTTCTTCCGCTGAGTATATGCTTGCTAATCTCCTATATTGGTTCGATTGGAAGCTGCCTAATGGTGTATCGATGCAAGACACAGACATGAGTGAGATAAACGGGCTCACTGTCTGCAAGAAAGTACCACTTCATCTTGAAGCTGCACCGTACTCATTTGGATCTACACCTAACATGTGA 1566 0.4176 MSFLPSSVLKQLLYELNSTLYLTAFFCLISLVFMLKLRRRNKSNLPPSPPKLPIIGHIHQLGTLPHHSFQALSHKYGPIMMLQLGQIPALVVSSVDVVKEIFQNHDTAFSNRPQTTAEKIIMYGCKDVAFAPYGEEWRQKRKICVLELLSLKRVRSFRSIREEEVAQLVDMAREACERKRSSVNLSEMLIVASNNIVSRCVLGQKYDNPDGSSSFGELGRKMMEHLAALSVGDFFPSLGWIDVLTGKIPEFKSTFRALDAFFDRVIEEHKRMKRDEGQSDDKDFVEILLQIQEGGKHDFQLTHDDVKAFLMDIFAGGSDTTSTLLEWTFAELMRNPNAMKKAQEEVRRVVGYKSQVDENDVNQMNYLKCVVKETLRLRPPAPLLIPRETLSDVKVKGFDIPSKTRVFVNAWAIQRDPKIWNRPEEFLPERFEEQPEVNFKGQDLQLIPFGTGRRGCPGISFGVSSAEYMLANLLYWFDWKLPNGVSMQDTDMSEINGLTVCKKVPLHLEAAPYSFGSTPNM 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4058g00003 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Gabi4058g00003 521 Gene3D Cytochrome P450 31 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 FunFam Cytochrome P450 83B1 33 509 - -
Gabi4058g00003 521 CDD CYP71-like 75 506 - -
Gabi4058g00003 521 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 PANTHER CYTOCHROME P450 71B11-RELATED 31 510 - -
Gabi4058g00003 521 Pfam Cytochrome P450 46 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00003 521 SUPERFAMILY Cytochrome P450 46 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4058g00003 Gabi-Chr4058 60654 62547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4058g00003 28 513 Cytochrome P450 AT3G48280 42.536 1.25e-144 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4058g00003 K20617 - gmx:100792382 666.381