Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4058g00002 ATGGCTCTATTTCTGAAGCAAGTACCCTACGACCTTATAAATGCTAACCTTTTCGTGTTTCTTTCATGCTTCATCAGCATGCTGCTGGTGTTTAAGCTCACAAGAAGAAGCAAATCGAATCTACCTCCATCCCCACCTAAACTCCCGATTATTGGTAATTATCATCAGTTAGGAACACTTCCTCATCGTTCCTTTCAAGCTCTATCACAAAAGTATGGTCCTCTATTGTTGTTGCAGCTTGGTCAGCTTCCTGTTTTGGTCGTCTCCTCTGTAGAATTCGCCAGAGAAGTCATGAAAACTCATGACGTAGTTTTTGCGAGCCGACCCCACCTCACAGCAACAAAAGTCTTACTCTATGGATGTAAGGACGTTGCATTTGCATCCTATGGTGAAACCTGGAGACAGAAAAGGAAACTCTGTGTACTTGAATTGCTGAGCATGAAAAGGGTGCAATCTGTTCAATTCATTAGAGAAGAGGAAGTTGCTGTGTTGGTTAGTAAGATACACAAAGCCTGTAATAATGGTTGCTCTGTGAACCTTAGTGAGATGCTTATTACAACCGCGAACAACATAATCTGTAGATGTATATTCGGAAGGAAGTATGATGAAGAAGATGGCTCTGTTAATTACAGACTCAGAGAGCTTATGAGGAGGACGATGATTCAAGTTTCAGATTTCAATCTGGGAGATATGTTTCCTTTATTGGGTTGGATTGACTCTCTCACTGGCCAGATTAAAAAATATAAGGCCACTTTTGATGCATTTGATGCTTTCTTTGATCATATAATTGCAGAGCGTAAGACGGCAAGGAGGGACTCTGAGAAGAAAGACTTCCTCGACATTCTCCTTCAACTTGAAGAAGATGGTATGCCAGAGTTTGAGCTCACCCAAGATGACCTAAAAGCGCTCATTTTGGACATGTTTTTGGGAGGAACTGACACAACTTCAACAACAATAGAATGGACTATTGCAGAGCTTGTAAAAAATCCAGTGACAATGAAGAAAGCGCAGGAGGAGGTAAGAAGAGTTGTAGGGAATAATCCAAAATTAGAGGACAATGATGTTAATCAAATGGAATACGTGAAATGTGTTGTGAAAGAAACTCTGAGGTTACATCCAGTTGCTCCTCTTTTAGCTCCTCGAGAAACAACATCAAGTGTTAAACTCGGAGGATATGATATTCCTGATAGAACAATGGTTTATGTCAACGCATGGGCAATTCAGAGGGACCCTAGATTTTGGGAAATGCCTGAAGAATTTCTACCCGAGAGATTTGAAAACAGTGAGGTGAATTTCAATGGTCAAGACTTTCAATTTATCCCATTTGGTTCCGGAAGAAGGAAATGTCCTGGTATGACGTTTGGGCTTGCTTCCGCCGAGTATATGCTTGCTAATCTTCTATATTGGTTCGATTGGAAGCTACCTAGAGATGGTGCAACTGTTCAAGAATTGGACATGAGTGAGAAATATGGGCTCACTGTTAACAAGAAAGTACCTCTTTATCTCGAACCAATGCCGTACTTCAATCTCTAA 1533 0.409 MALFLKQVPYDLINANLFVFLSCFISMLLVFKLTRRSKSNLPPSPPKLPIIGNYHQLGTLPHRSFQALSQKYGPLLLLQLGQLPVLVVSSVEFAREVMKTHDVVFASRPHLTATKVLLYGCKDVAFASYGETWRQKRKLCVLELLSMKRVQSVQFIREEEVAVLVSKIHKACNNGCSVNLSEMLITTANNIICRCIFGRKYDEEDGSVNYRLRELMRRTMIQVSDFNLGDMFPLLGWIDSLTGQIKKYKATFDAFDAFFDHIIAERKTARRDSEKKDFLDILLQLEEDGMPEFELTQDDLKALILDMFLGGTDTTSTTIEWTIAELVKNPVTMKKAQEEVRRVVGNNPKLEDNDVNQMEYVKCVVKETLRLHPVAPLLAPRETTSSVKLGGYDIPDRTMVYVNAWAIQRDPRFWEMPEEFLPERFENSEVNFNGQDFQFIPFGSGRRKCPGMTFGLASAEYMLANLLYWFDWKLPRDGATVQELDMSEKYGLTVNKKVPLYLEPMPYFNL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4058g00002 510 PANTHER CYTOCHROME P450 71B11-RELATED 28 505 - -
Gabi4058g00002 510 Gene3D Cytochrome P450 27 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 CDD CYP71-like 85 500 - -
Gabi4058g00002 510 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 Pfam Cytochrome P450 42 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 FunFam Cytochrome P450 83B1 29 503 - -
Gabi4058g00002 510 SUPERFAMILY Cytochrome P450 42 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00002 510 Coils Coil 333 353 - -
Gabi4058g00002 510 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Gabi4058g00002 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4058g00002 Gabi-Chr4058 57205 58851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4058g00002 18 505 Cytochrome P450 AT5G25140 44.399 3.17e-149 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4058g00002 K20617 - cave:132175480 608.216