Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4058g00001 ATGGCTCTGCTATTGTCATATGAGCCATACTCAACCTTTTTCTTTTCTATTTTCTGCTTTGTAAGCGTTGTGTTGGCGCTTAAGCTCTTAAGAAGAAACAAATACAATCTTCCTCCGTCTCCCCCAAAGTTACCCATCATTGGCAATCTTCATCAACTTGGCACACTCCCACATCGCTCTTTCCGAACACTTTCCGACAAGTATGGCCCTTTGATGTTGCTGCAATTGGGTCAAACTCCAACTCTTATAGTTTCATCAGCCGATGTGGCCAGAGAAATAACAAAAATACATGATGTTGCTTTCTCCAACAGGCCTCAAATTACAGCTGCAAAAATCTTTTTCCATGGATTCATGGATGTGGGTTTTGCACCCTACGGCGAGGAGTGGAGACAAAAAAAGAAGATCTGTGTTCTTGAGCTTTTGAGCCAGAAAAGGGTGGGATCTTTTCACTCCATCAGACAAGAAGAAATTACAGAGTTGGTTGATACTATACGTGATGCATGTGCGAGTAAAAGATCCTCTGTGAATCTAAAGGAGATGTTGTTTGCAGCCTCAAACAATATTGTATCTAGATGTGTTCTTGGACAAAAATATGATACTCCATATGGTACTACAAGCATTGGAGTGCTAGCAAGGAAGACTATGAAATTATTGGCAGCTTTCAGCGTTGGCGATTTCTTCCCTTCATTGGGTTGGATTGATGTTCTTACGGGCCTAATTTCAGAAGTTAAGTCCACTTCTGTTGCATTAGATGCTTTCTTTGATGAGGTAATTGCACAACACAAGAGAAGCAACAAAAACGATGACAAAAACGATATTAAAGACTTTGCAGGGATCCTCCTTCAACTTCAAGAGGGTGGGAAGCTTGACTTTGAGCTTACACAAGTTAACCTCAAAGCACTCCTAATGGACATGTACGTCGGTGGAAGTGACACTACTTCAACCAATCTGGAATGGGCTTTTGCTGAGCTCGTTAAGAATCCAAATACCATGAAGAAAGTCCAACAAGAGGTAAGAAGAGTTGTGGGGAAAAAATCAAAAGTGGATGAAAATGATGTGAATGAAATGAACTACTTGAAATGTGTAATCAAGGAAACTTTGAGATTACATCCACCTGTTCCCCTTTTGGTTCCTCGAGAGACAATATCAAGTGTGAAACTAAAAGGGTATGATATTCCCCCCAAAACAAGGGTATTTATGAACGCATGGGCAATACAGAGAGACCCTGAATTATGGGACAATCCTGAAGAGTTTCTTCCCGAGAGATTTGAAGGTAACCAAGTTGATGTTAAAGGACAAGATTTTCAATTGATCCCATTTGGAATTGGGAGAAGGCAATGTCCTGGAATTTCATTTGGGCTTGCTTCTACAGAGTATATACTTGCTAATCTTCTATATTGGTTCGATTGGAAGCTACCTAAAACTGGTGTATTGATGCAGGACTTAGACATGAGTGAGATGAATGGACTCACTGTCACCAAGAAAATACCACTTCATCTTGAACCAATACTATACTCTTTTGGTTCTAAACCTTGA 1536 0.403 MALLLSYEPYSTFFFSIFCFVSVVLALKLLRRNKYNLPPSPPKLPIIGNLHQLGTLPHRSFRTLSDKYGPLMLLQLGQTPTLIVSSADVAREITKIHDVAFSNRPQITAAKIFFHGFMDVGFAPYGEEWRQKKKICVLELLSQKRVGSFHSIRQEEITELVDTIRDACASKRSSVNLKEMLFAASNNIVSRCVLGQKYDTPYGTTSIGVLARKTMKLLAAFSVGDFFPSLGWIDVLTGLISEVKSTSVALDAFFDEVIAQHKRSNKNDDKNDIKDFAGILLQLQEGGKLDFELTQVNLKALLMDMYVGGSDTTSTNLEWAFAELVKNPNTMKKVQQEVRRVVGKKSKVDENDVNEMNYLKCVIKETLRLHPPVPLLVPRETISSVKLKGYDIPPKTRVFMNAWAIQRDPELWDNPEEFLPERFEGNQVDVKGQDFQLIPFGIGRRQCPGISFGLASTEYILANLLYWFDWKLPKTGVLMQDLDMSEMNGLTVTKKIPLHLEPILYSFGSKP 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4058g00001 511 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 FunFam Cytochrome P450 83B1 25 501 - -
Gabi4058g00001 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Gabi4058g00001 511 SUPERFAMILY Cytochrome P450 38 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 CDD CYP71-like 67 498 - -
Gabi4058g00001 511 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 PANTHER CYTOCHROME P450 71B11-RELATED 24 502 - -
Gabi4058g00001 511 Gene3D Cytochrome P450 24 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4058g00001 511 Pfam Cytochrome P450 38 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4058g00001 Gabi-Chr4058 17885 19637 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4058g00001 25 503 Cytochrome P450 AT5G57260 43.827 1.91e-147 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4058g00001 K20617 - gmx:100792382 701.434