Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4055g00001 ATGACTTTGAATGCTACATCTGGAAATGCTTGCCCGTCACCAATGAAACCCACATCAAATGGTGTATTTCAGGGAGATAATCCTCTTGATTATGCACTTCCCCTGGCTATTTTACAGATATGCCTTGTTCTTGTAGTCACAAGGGGACTCGCATACCTTCTAAGACCTTTAAGGCAACCACGAGTTATTGCAGAGATTGTTGGAGGAATATTACTTGGGCCATCAGCACTTGGACGGAATAAAAGCTATCTGCATGCAGTTTTCCCACCAAAGAGTCTTACAGTATTAGATACTCTTGCAAACATTGGCCTTATATTCTTTCTCTTCCTAGCAGGCCTAGAGTTAGATCCTAAATCTGTGCGTCAGACTGGAAAACAAGCCTTTGGCATTGCTATGGCTGGAATAAGCTTGCCTTTTGCAATAGGAATTGGTTCATCATTCGTTCTGCATGAAACAATTAACAGAGGCGGAGATAGTACCACATTTCTTGTATTTATGGGTGTTGCTCTGTCGATAACTGCATTTCCTGTATTAGCTCGTATTTTGGCAGAGTTGAAACTTCTAACCACTAATGTTGGCAGAATGGCTATGTCAGCTGCAGCAGTTAATGATATAGCTGCCTGGATTCTGCTTGCCCTGGCTGTTGCCTTATCAGGCAAGAGCCAATCTCCACTTGTGTCCTTGTGGGTCTTCTTATCTGGGTGTGGTTTTGTAATTTGTTCAATCCTCATTGTCCCCCCAATTTTCAAATGGATGGCCCAACGATGCCATGAAGGGGAGCCGGTTGAGGAGATATACATATGTGCTACGTTAGCTGTAGTTCTAGCTGCTGGGTTTGCCACAGATGCTATTGGAATCCATGCTATGTTTGGCGCTTTTGTTATTGGAGTTTTGGTCCCAAAAGATGGTCCATTTGCCAGTGCTCTTGTGGACAAAGTAGAGGATCTTGTGTCTGGTCTGTTGCTCCCACTCTATTTTGTGTCAAGTGGATTAAAGACCGATGTAGCCACCATTCGGGGGCTGCAATCATGGGGTCTTCTGGCTTTTGTTATATTTACGGCTTCTTTTGGGAAGATTGTTGGGACTGTTGTAGTGTCTCTTTTCTGTAAAGTACCTTTTAATGAGGCTTTAATGTTGGGATTCTTAATGAATAGTAAAGGCTTGGTTGAATTAATTGTCCTCAACATCGGTAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCCATTATGGTTCTTATGGCTCTCTTTACTACCTTCATTACCACTCCTCTTGTCATTGCTGTGTATAAGCCCGCAAGGAAGACGGCTGATTACAAATACAGAACAATTGAAAGGAAAACTGCAAATAGCCAACTGAGGATTCTTGCCTGCTTCCATGGTGCGAGAAATATTCCATCAATGATAAATTTGATTGAGGCTTCAAGAGGAATCCAGAAGCGTGATGCACTTTGTGTGTATGCAATGCACCTTAAAGAACTTTCCGAGAGATCATCATCTATACTAATGGTTCATAAGGCAAGGAAAAATGGGTTGCCATTCTGGAATAAAGGTCAACGTGCAGATTCTAACCATGTTATTGTGGCATTTGAGGCTTACAGGCAACTAAGCCAAGTTTCTGTCCGGCCAATGATAGCAATTTCATCCATGGCTAGCATACATGAAGACATTTGTGCAACTGCTGAGAGAAAGAGAGCTGCTGTCATTATTCTTCCATTTCATAAGCATCAAAGGTTGGATGGTTCACTAGATATTACAAGAAATGATTTTCGATCGGTTAACAAAAGGGTACTTGAGTATGCTCCATGCTCAGTTGGAATTCTTGTTGATCGTGGGCTTGGTGGTACATCTCAGGTATCTGCAAGTAATGTTTCTTATTGCATTACAGTCCTTTTCTTTGGTGGTGGTGATGACCGTGAGGCCCTTGCTTATGGAGGTCGAATGGCTGAACATCCAGGCATAAGATTAGTGGTTCTTCGCTTTGTGCTGGAACATAGGATTGTAGGAGAGATAGTTAGAGTTGATGTGGGAGAGTCCTCCAGCACCAAAATAATCTCAGAAGATGAGGAGTTCCTTGCTGAATATAAGCTGAAAATAGCCAATGATGACTCCATCGTCTATGAAGAGAAAATAGTAAAAAGTGCTGCAGAAACAGTTGCTACTATCCGTGAGTTTAATTGCTGCAATCTGTTTCTCGTGGGTCGAAGACCAGCAGGTGAAGTGGCCTATGCTCTGAAAAGAAGTGAATGCCCCGAACTAGGACCCGTCGGTGGTTTCTTGGCATCACAAGATTGCCCCGCAACAGCATCGGTTTTGGTGATGCAACAGTATCACAATGGGGTGCCAATAGAATTTATCTCAGAAGTGGAAGAACAGTTATCTGATAGAGACCCAGAATCTGCTTAA 2406 0.426 MTLNATSGNACPSPMKPTSNGVFQGDNPLDYALPLAILQICLVLVVTRGLAYLLRPLRQPRVIAEIVGGILLGPSALGRNKSYLHAVFPPKSLTVLDTLANIGLIFFLFLAGLELDPKSVRQTGKQAFGIAMAGISLPFAIGIGSSFVLHETINRGGDSTTFLVFMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDIAAWILLALAVALSGKSQSPLVSLWVFLSGCGFVICSILIVPPIFKWMAQRCHEGEPVEEIYICATLAVVLAAGFATDAIGIHAMFGAFVIGVLVPKDGPFASALVDKVEDLVSGLLLPLYFVSSGLKTDVATIRGLQSWGLLAFVIFTASFGKIVGTVVVSLFCKVPFNEALMLGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPLVIAVYKPARKTADYKYRTIERKTANSQLRILACFHGARNIPSMINLIEASRGIQKRDALCVYAMHLKELSERSSSILMVHKARKNGLPFWNKGQRADSNHVIVAFEAYRQLSQVSVRPMIAISSMASIHEDICATAERKRAAVIILPFHKHQRLDGSLDITRNDFRSVNKRVLEYAPCSVGILVDRGLGGTSQVSASNVSYCITVLFFGGGDDREALAYGGRMAEHPGIRLVVLRFVLEHRIVGEIVRVDVGESSSTKIISEDEEFLAEYKLKIANDDSIVYEEKIVKSAAETVATIREFNCCNLFLVGRRPAGEVAYALKRSECPELGPVGGFLASQDCPATASVLVMQQYHNGVPIEFISEVEEQLSDRDPESA 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4055g00001 801 Pfam Sodium/hydrogen exchanger family 42 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Gabi4055g00001 801 Gene3D - 481 753 - -
Gabi4055g00001 801 FunFam Cation/H(+) antiporter 15 35 437 - -
Gabi4055g00001 801 PANTHER CATION/H + ANTIPORTER 10 778 - -
Gabi4055g00001 801 Gene3D - 35 438 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4055g00001 Gabi-Chr4055 5482 9662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4055g00001 1 800 Antiporter Super Family AT5G41610 69.051 0.0 1091
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4055g00001 K26731 - gmx:100810155 1311.59