Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4050g00001 ATGAACCCAAAAATCTCAGACTTTGGCCTGGCTCGGACTTTTGGGGGAGATCAAATTGAAGCCAAAACAAAAAAACTGGTTGGAACATATGGTTACATGCCTCCAGAATATGCTGCGCATGGTCATTACTCCGTGAAATCAGATGTGTTCAGTTTTGGTGTAATAATACTCGAGATAGTCAGTGGGAAAAAGAATAGAGGATTTTCTGACCCAGAACATTCTCTTAATCTGCTTGGACATGCATGGAGACTCTGGACTGAAGACAGGCCATTGGAGCTTATAGAAAAACATTTACGCGAAAGATACGTTTTATCTGAAGTCTTAAGATGCATACATGTGGGTTTGTTATGCGCACAACAAAAACCAGGAGACAGGCCGGACATGTCCTCTGTCATTCTTATGCTGAATGGTGAAAAATTGTTGCCCCAGCCAAAGCCCCCTGGATTTTATACTGGAAGGAGTTTACCTGAATCAGTATCTTCAAATGAGATGTCCCTCACAATTTTTGAGGCTAGATAG 519 0.4181 MNPKISDFGLARTFGGDQIEAKTKKLVGTYGYMPPEYAAHGHYSVKSDVFSFGVIILEIVSGKKNRGFSDPEHSLNLLGHAWRLWTEDRPLELIEKHLRERYVLSEVLRCIHVGLLCAQQKPGDRPDMSSVILMLNGEKLLPQPKPPGFYTGRSLPESVSSNEMSLTIFEAR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4050g00001 172 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 169 - -
Gabi4050g00001 172 Pfam Domain of unknown function (DUF3403) 141 172 IPR021820 GO:0004674
Gabi4050g00001 172 Pfam Protein tyrosine and serine/threonine kinase 4 132 IPR001245 GO:0004672|GO:0006468
Gabi4050g00001 172 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 14 140 - -
Gabi4050g00001 172 SUPERFAMILY Protein kinase-like (PK-like) 1 162 IPR011009 -
Gabi4050g00001 172 Gene3D Transferase(Phosphotransferase) domain 1 1 141 - -
Gabi4050g00001 172 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4050g00001 Gabi-Chr4050 8539 9241 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4050g00001 1 150 Receptor kinase-like Gene Family AT4G11480 56.579 3.26e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi4050g00001 PK_Tyr_Ser-Thr 6.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4050g00001 - - gmx:100782811 297.36