Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4046g00037 ATGGATCTTGCTTTCAATTTCCAAACTATTTCTGCAATATTAGCTTTATTGATTGTATATACTGTTTTTAGGTCCATTACATCAAATAATGGACCTAAAGAAATCAAGGGTAGCTCCAAGTATAACAAAGTGCCTGAACCATGTGGTGCTTTGCCTTTCATAGGTCACCTCCATCTTCTAAATGCTAATGAACCATATTTTAGGACCTTTTCAGCTATGGCTGAGAAATATGGTTCAATCTTCTCCCTCAGGCTTGGTTGCCACAACACCTTAGTTGTGAGTAACAGGGAAATTGCCAAAGAATGCCTCATAACAAATGACAAAGCTTTTGCTTCAAGGCCAAACATAGCTGCAGGGAGATACATGGGTTACAACAATGCCATTTTGGGTCTTGCCCCTTATGGAAAATACTGGCGTGACATGAGAAAAATTGCCACCCTTGAGATTCTTTCAAGTCACAGGCTTGAAAAGCTTAAGCATGTTAGAGACAGAGAAATATTTTCTCTTGTCAAAGATCTGTACAACTCATTATCATTGGCAAAGAATATGAGTAATTCAATTGAAGTTCCAATAAGCAATTTTTTGGAACACATGACATTTAATTATATTGTGCAGATGATAGCAGGGAAGCGATTTAGTGCTGAGACCATACGGCAAGGAGATAGTGAGGCATGGAGATTAAGGAGGGCTATCAAAGATTTTACATATCTCAGTGGTGTTTTTGTGATGGCTGATGCTATTCCTTACCTTAGTTGGTTTGATTTTCAAGGGCATGTGAGTTTCATGAAGAGGACTTTTAAGGAAATAGACTTGATTCTTGATAAGTGGATGAATGAACATGTGAGAAAGAGGGTTGAAGATGGGAATGGTGGATGTGAAAATGACTTCATGGATGTGTTGATATCGACGTTTGAAGAACATGATGTGTTTTGTGGCCACAAGCGGGAGATAGTGATAAAAGCAACAGCACTGTTTCTTATCCTTACGGCCTCAGGAAGCACAGCCATAACACTAACATGGGCACTTTCCTTGCTCCTAAACCATCCAAGTGTCCTGAAGGCTGCACAACAAGAGCTAGACAACAAAATTGGAAAAGACAAATGGGTTCAGGAATGTGACATCAAAGACCTCAATTATTTACAAGCCATTATCAAAGAGACCCTTCGTCTATACCCAGCAGCACCCTTAACAGGAATAAGGGAAGCCATTGATGATTGCAATGTGGCAGGTTACCATGTCCCAAAAGGCACTCGTTTGTTTGTTAACCTATGGAAGCTACAGAGAGACCCAAAAATATGGTCCAACCCTGATGAGTTTCAACCTGAGAGGTTCCTCACCACTCATGTAGACCTTGATTTCCAGAGTCAGAACTTTGAGTTTATACCATTTAGCTTTGGAAGAAGATCATGTCCTGGCATGACATTTGGGCTGCAAGTGGTTCACTTGACTCTGGCTCGGTTGCTTCAAGGGTTTGATATATACACAAAATCAGGTGTTCCAGTTGATATGAAAGAAGGTTTAGGAGTGGCCATGCCTAAGGAAAACACACTTAAAGTTATTCTCCAACCACGTCTTCCAATGGAGCTTTATGAAAGTCTTTAA 1602 0.402 MDLAFNFQTISAILALLIVYTVFRSITSNNGPKEIKGSSKYNKVPEPCGALPFIGHLHLLNANEPYFRTFSAMAEKYGSIFSLRLGCHNTLVVSNREIAKECLITNDKAFASRPNIAAGRYMGYNNAILGLAPYGKYWRDMRKIATLEILSSHRLEKLKHVRDREIFSLVKDLYNSLSLAKNMSNSIEVPISNFLEHMTFNYIVQMIAGKRFSAETIRQGDSEAWRLRRAIKDFTYLSGVFVMADAIPYLSWFDFQGHVSFMKRTFKEIDLILDKWMNEHVRKRVEDGNGGCENDFMDVLISTFEEHDVFCGHKREIVIKATALFLILTASGSTAITLTWALSLLLNHPSVLKAAQQELDNKIGKDKWVQECDIKDLNYLQAIIKETLRLYPAAPLTGIREAIDDCNVAGYHVPKGTRLFVNLWKLQRDPKIWSNPDEFQPERFLTTHVDLDFQSQNFEFIPFSFGRRSCPGMTFGLQVVHLTLARLLQGFDIYTKSGVPVDMKEGLGVAMPKENTLKVILQPRLPMELYESL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4046g00037 533 CDD CYP82 78 524 - -
Gabi4046g00037 533 FunFam Cytochrome P450 82C4 34 522 - -
Gabi4046g00037 533 SUPERFAMILY Cytochrome P450 45 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00037 533 Gene3D Cytochrome P450 34 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00037 533 PANTHER CYTOCHROME P450 82C3-RELATED 15 530 - -
Gabi4046g00037 533 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00037 533 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00037 533 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00037 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Gabi4046g00037 533 Pfam Cytochrome P450 46 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00037 533 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00037 533 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00037 533 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00037 533 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00037 533 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00037 533 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00037 533 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00037 533 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4046g00037 Gabi-Chr4046 513981 520330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4046g00037 45 530 Cytochrome P450 AT4G31970 49.695 4.73e-172 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4046g00037 K17961 - gmx:100787489 792.341