Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4046g00036 ATGTGCAAGTATTGTGATTACTCAATCCTCTCCAAGGACCCTATGGATCTTGCTTTCAATTTCCAAACTATTTCTGCAATATTAGCTTTATTGATTGTATATACTGTTTTTAGGTCTATTACAACAAAGTACAAGTACAACAAAGTGCCTGAACCATGTGGTGCTTTACCTTTCGTAGGTCACCTCCATCTTCTAAATGCTAATGAACCATATTTTAGGACCTTTTCAGCTATGGCTGAGAAATATGGTTCAATCTTCTCCCTCAGGCTTGGTTGCCACAACACCTTAGTTGTGAGTAACAGGGAAATTGCCAAAGAATGCCTCATAACAAATGACAAAGCTTTTGCTTCAAGGCCAAGCATAGCTGCTGGGAGATACATGGGTTACAACAATGCCGTTTTGGGTCTTGCCCCTTACGGAAAATACTGGCGTGACATGAGAAAAATTGCCACTCTCGAGATTCTTTCAAGTTACAGGCTTGAAAAGCTTAAGCATGTTAGAGACATAGAAATATTTTCTCTTGTCAAAGATTTGTACAACTCGTTATCATTTGCAAAGAATGAGAGTAATTCAATTGAAGTTCCTCTAAGCAATTTTTTGGAACACATGACATTTAATTATATTGTGAAGATGATAGCAGGGAAGCGATTTAGAACTGAAACCATAGGGCAAGAAGACAGTGAGGCATGGAGATTAAGGAGGGCTATCAAAGATGCTACATATCTCAGTGGTGTTTTTGTGATGGCTGATGCTATTCCTTATCTTGGTTGGTTTGATTTTCAAGGGTATGTGAGTTTCATGAAGAGGACTTTCAAGGAAATAGATCTGATTCTTGATAAGTGGATGAATGAACATGTGAGAAACAGAGTTCAAGATGAGAATGGTGGATGTGAGCATGACTTCATGGATGTGTTGATATCCACGTTTGAAGAGCATGATGTGTTTTGTGGCCACAAGCGGGAGATAGTGATAAAAGCAACGGCACTGATTCTTATCCTTACTGCCTCAGGAAGCACAGCCATAACACTAACATGGGCACTTTCCTTGCTTCTAAACCATCCAAGTGTCCTAAAGGCTGCAAAACAAGAGCTAGACACCAAAATAGGAAAAGACAAATGGGTTCAGGAATGTGACATCAAAGACCTCAATTATTTACAAGCCATTGTCAAAGAGACCCTTCGTCTATACCCACCAGCACCCTTAACAGGAATTAGGGAAGCCATTGATGATTGCTACGTGGCAGGTTACCATGTCCCAAAAGGCACTCGTTTGCTTATTAATCTATGGAAGTTACAGAGAGACCCAAAAATATGGTCCAACCCTGATGAGTTTCAACCTGAGAGGTTCCTCACCACTCATGTAGACCTTGATTTTCAGAGTCATAACTTTGAGTTTATCCCATTTAGCTTTGGAAGAAGGTCATGTCCTGGCATGACATTTGGGCTGCAAGTGGTTCACTTGACTCTGGCTCGGTTGCTTCAAGGGTTTGATATATGCACAAAATCAGGTGCTCCAGTTGATATGAATGAAGGTTTAGGAGTGGCCTTGCCTAAGGAAAACACACTTGAAGTTGTGCTCCATCCTCGTCTTCCATTGGAGCTTTACGAAAGTCTGAAGTAA 1620 0.4068 MCKYCDYSILSKDPMDLAFNFQTISAILALLIVYTVFRSITTKYKYNKVPEPCGALPFVGHLHLLNANEPYFRTFSAMAEKYGSIFSLRLGCHNTLVVSNREIAKECLITNDKAFASRPSIAAGRYMGYNNAVLGLAPYGKYWRDMRKIATLEILSSYRLEKLKHVRDIEIFSLVKDLYNSLSFAKNESNSIEVPLSNFLEHMTFNYIVKMIAGKRFRTETIGQEDSEAWRLRRAIKDATYLSGVFVMADAIPYLGWFDFQGYVSFMKRTFKEIDLILDKWMNEHVRNRVQDENGGCEHDFMDVLISTFEEHDVFCGHKREIVIKATALILILTASGSTAITLTWALSLLLNHPSVLKAAKQELDTKIGKDKWVQECDIKDLNYLQAIVKETLRLYPPAPLTGIREAIDDCYVAGYHVPKGTRLLINLWKLQRDPKIWSNPDEFQPERFLTTHVDLDFQSHNFEFIPFSFGRRSCPGMTFGLQVVHLTLARLLQGFDICTKSGAPVDMNEGLGVALPKENTLEVVLHPRLPLELYESLK 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4046g00036 539 FunFam Cytochrome P450 82C4 40 527 - -
Gabi4046g00036 539 PANTHER CYTOCHROME P450 82C3-RELATED 29 535 - -
Gabi4046g00036 539 Pfam Cytochrome P450 51 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00036 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Gabi4046g00036 539 CDD CYP82 83 529 - -
Gabi4046g00036 539 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00036 539 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00036 539 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00036 539 Gene3D Cytochrome P450 37 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00036 539 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00036 539 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00036 539 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00036 539 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00036 539 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00036 539 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00036 539 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00036 539 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4046g00036 539 SUPERFAMILY Cytochrome P450 50 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4046g00036 Gabi-Chr4046 488916 493737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4046g00036 30 535 Cytochrome P450 AT4G31970 48.141 2.96e-168 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4046g00036 K17961 - gmx:100787489 795.808