Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4046g00015 ATGATATCTCTGTTCACCAAAGCCTTAATTGCCACTCGATTCCTTCCCCGAACTCGAACTTGTCCTTCTAAACTAACAGCTATTCAAACCATGAGCTCCCAGTGCATCTTCCAGCTCAAGCTTGACCCACTAACAGGTAACTCTGAATGGGTAGTCATTGAAGAAAACGACAACGAACAAAGCTTTCCCCATAATTTCAACCAACCCCTTCTCGCCACGACGTCGTATTTGGACATGCTCAACGACTCCACCAGAAACAGAGCATTTCGTGAAGCCATAGAGAAAACCATCACCAAACCTTGCCACGTTCTTGATATCGGTGCTGGAACTGGTTTGCTTTCGATGATGGCTGCACGAGCTATGGGCTCTTCTGGAAGGGTCACTGCGTGTGAGTCTTACCTTCCGATGGTGAAGTTGATGAAGAAGGTGCTGCGTCTTAATGGGATGGAGGGAAGAATCAAGGTCATCAACAAGCGCTCTGATGAACTCATTGTTGGCCTTGATATCCCTTCACGTGCAGATGTACTTGTAAGCGAGATTCTAGATTCAGAATTATTAGGTGAGGGGCTTATACCGACCCTACAACATGCGCATGACAATTTGTTGATGGAAAACCCTCTGACTGTGCCATATCGAGCAACTACATATGGACAGCTGGTTGAAAGTACATTCTTATGGAAGCTGCATGATTTGCATAACAATGAGGCTAGTGCATCTGATGGCATTCGTCTTACCCCTCCCGAACTTGATAGTGTTTTGAGTGTCAAACGTCAGCAATATGCCATGCATTGTGATCCAATAGGAGAAGAAATAAAGCCACTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTATGGAGAAACTGAGCTGTGCATAAAGGCAACTAATGATGGTAGAGCTCATGCTGTGGTCTCTTGGTGGGTACTTCAACTTGATCGTGAAGGGACAATCTATTATTCCACTGCCCCTAGGTGGATAAGCTCGCCAACAATTACAAGTCCTGTTGATTGGTGTGACCACTGGAAACAGTGTGTTTGGTTTGTTCCAGGCAGTGGTATTTCCATATTGAAAGGGGAAGGAATTCATTTACGTGCTACTCATACTGACACTAGTATCTCATATAATTTAGATACCCAAGTTCCAACAACTAAGGTTTTGCATCAGGGGCTGACGACTGGAGATTTGCAGCTTGTACTGCCTCCAGAAAGGGCTGCAATCTATGGAGACAAAGGATGGAGGCTTTCAATGTTAAAAGCCATTGAAAGTGGGTTGCAGGGAAGAGGTCGCTCATTATGTTTGGTTGCAGATGATAGTATATTTTTACCGCTTCTTATGGCAAATCTTTCAGAAGCACCACATGTGATATCATTACTTCCGGGGTTGAAGGAAAGGGGCCTCCATTATTTGCAAGCCGCTGCCTGTGCTAATCGTTTGTCACCTAATTGCATTGAAGTTCTTGAAAAAAGGGTGAAACAGTTAACCATGCATGATACACACCAGAAAAAGGTTGATCTGTTAATAGCAGAACCTTTCTATTTGGGACATGATAGCATGCTTCCATGGCAGAACCTACGTTTTTGGAAGGATCGTACTACACTTGATTATATCCTATCTGAAGATGCTCTGATAATTCCTAGTAAAGGAATATTGAGGGCTTGTGCCATCTCTCTCCCTGATCTTTGGAAAAGTCGTTGCTGCGTGAGTAAGATAGAAGGTTTTGACCATTCGGTTGTAAATGCCACATTGGGGGCTTGCGGTCATCTACCTGAATTGGAAGAGGGTCCTTGTCTGCCTTTTTTTGTGTGGCAATGTGGAGAATTTGACGTAATTTATCTCCTTAAAATTCACATTTTGTAA 1878 0.4345 MISLFTKALIATRFLPRTRTCPSKLTAIQTMSSQCIFQLKLDPLTGNSEWVVIEENDNEQSFPHNFNQPLLATTSYLDMLNDSTRNRAFREAIEKTITKPCHVLDIGAGTGLLSMMAARAMGSSGRVTACESYLPMVKLMKKVLRLNGMEGRIKVINKRSDELIVGLDIPSRADVLVSEILDSELLGEGLIPTLQHAHDNLLMENPLTVPYRATTYGQLVESTFLWKLHDLHNNEASASDGIRLTPPELDSVLSVKRQQYAMHCDPIGEEIKPLSEPFKIFEFDFWKRPESYGETELCIKATNDGRAHAVVSWWVLQLDREGTIYYSTAPRWISSPTITSPVDWCDHWKQCVWFVPGSGISILKGEGIHLRATHTDTSISYNLDTQVPTTKVLHQGLTTGDLQLVLPPERAAIYGDKGWRLSMLKAIESGLQGRGRSLCLVADDSIFLPLLMANLSEAPHVISLLPGLKERGLHYLQAAACANRLSPNCIEVLEKRVKQLTMHDTHQKKVDLLIAEPFYLGHDSMLPWQNLRFWKDRTTLDYILSEDALIIPSKGILRACAISLPDLWKSRCCVSKIEGFDHSVVNATLGACGHLPELEEGPCLPFFVWQCGEFDVIYLLKIHIL 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4046g00015 625 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 76 380 IPR029063 -
Gabi4046g00015 625 Gene3D - 556 615 - -
Gabi4046g00015 625 CDD AdoMet_MTases 103 178 - -
Gabi4046g00015 625 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 41 375 IPR025799 GO:0016274|GO:0018216
Gabi4046g00015 625 Gene3D Vaccinia Virus protein VP39 69 211 IPR029063 -
Gabi4046g00015 625 FunFam Protein arginine N-methyltransferase 7 402 552 - -
Gabi4046g00015 625 FunFam Protein arginine N-methyltransferase 69 211 - -
Gabi4046g00015 625 Gene3D Vaccinia Virus protein VP39 403 552 IPR029063 -
Gabi4046g00015 625 FunFam Protein arginine N-methyltransferase 1.6 212 396 - -
Gabi4046g00015 625 Pfam Ribosomal protein L11 methyltransferase (PrmA) 91 183 - -
Gabi4046g00015 625 Gene3D - 212 395 - -
Gabi4046g00015 625 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 55 384 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4046g00015 Gabi-Chr4046 176548 181207 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4046g00015 56 216 C2H2 Transcription Factor Family AT3G12270 31.176 8.84e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4046g00015 K11438 - gmx:100785846 1078.54