Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4046g00012 ATGATATCTCTGTTCACCAAAGCCTTAATTGCCACTCGATTCCTTCCCCGAACTCGAACTTGTCCTTCTAAACTAACAGCTATTCAAACCATGAGCTCCCAGTGCATCTTCCAGCTCAAGCTTGACCCACTAACAGGTAACTCTGAATGGGTAGTCATTGAAGAAAACGACAACGAACAAAGCTTTCCCCATAATTTCAACCAACCCCTTCTCGCCACGACGTCGTATTTGGACATGCTCAACGACTCCACCAGAAACAGAGCATTTCGTGAAGCCATAGAGAAAACCATCACCAAACCTTGCCACGTTCTTGATATCGGTGCTGGAACTGGTTTGCTTTCGATGATGGCTGCACGAGCTATGGGCTCTTCTGGAAGGGTCACTGCGTGTGAGTCTTACCTTCCGATGGTGAAGTTGATGAAGAAGGTGCTGCGTCTTAATGGGATGGAGGGAAGAATCAAGGTCATCAACAAGCGCTCTGATGAACTCATTGTTGGCCTTGATATCCCTTCACGTGCAGATGTACTTGTAAGCGAGATTCTAGATTCAGAATTATTAGGTGAGGGGCTTATACCGACCCTACAACATGCGCATGACAATTTGTTGATGGAAAACCCTCTGACTGTGCCATATCGAGCAACTACATATGGACAGCTGGTTGAAAGTACATTCTTATGGAAGCTGCATGATTTGCATAACAATGAGGCTAGTGCATCTGATGGCATTCGTCTTACCCCTCCCGAACTTGATAGTGTTTTGAGTGTCAAACGTCAGCAATATGCCATGCATTGTGATCCAATAGGAGAAGAAATAAAGCCACTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTATGGAGAAACTGAGCTGTGCATAAAGGCAACTAATGATGGTAGAGCTCATGCTGTGGTCTCTTGGTGGGTACTTCAACTTGATCGTGAAGGGACAATCTATTATTCCACTGCCCCTAGGTGGATAAGCTCGCCAACAATTACAAGTCCTGTTGATTGGTGTGACCACTGGAAACAGTGTGTTTGGTTTGTTCCAGGCAGTGGTATTTCCATATTGAAAGGGGAAGGAATTCATTTACGTGCTACTCATACTGACACTAGTATCTCATATAATTTAGATACCCAAGTTCCAACAACTAAGGTTTTGCATCAGGGGCTGACGACTGGAGATTTGCAGCTTGTACTGCCTCCAGAAAGGGCTGCAATCTATGGAGACAAAGGATGGAGGCTTTCAATGTTAAAAGCCATTGAAAGTGGGTTGCAGGGAAGAGGTCGCTCATTATGTTTGGTTGCAGATGATAGTATATTTTTACCGCTTCTTATGGCAAATCTTTCAGAAGCACCACATGTGATATCATTACTTCCGGGGTTGAAGGAAAGGGGCCTCCATTATTTGCAAGCCGCTGCCTGTGCTAATCGTTTGTCACCTAATTGCATTGAAGTTCTTGAAAAAAGGGTGAAACAGTTAACCATGCATGATACACACCAGAAAAAGGTTGATCTGTTAATAGCAGAACCTTTCTATTTGGGACATGATAGCATGCTTCCATGGCAGAACCTACGTTTTTGGAAGGATCGTACTACACTTGATTATATCCTATCTGAAGATGCTCTGATAATTCCTAGTAAAGGAATATTGAGGGCTTGTGCCATCTCTCTCCCTGATCTTTGGAAAAGTCGTTGCTGCGTGAGTAAGATAGAAGGTTTTGACCATTCGGTTGTAAATGCCACATTGGGGGCTTGCGGTCATCTACCTGAATTGGAAGAGGGTCCTTGTCTGCCTTTTTTTGTGTGGCAATGTGGAGAATTTGACGTAATTTATCTCCTTAAAATTCACATTTTGTGCTTAGTGAGACATTTGATGTGA 1899 0.4344 MISLFTKALIATRFLPRTRTCPSKLTAIQTMSSQCIFQLKLDPLTGNSEWVVIEENDNEQSFPHNFNQPLLATTSYLDMLNDSTRNRAFREAIEKTITKPCHVLDIGAGTGLLSMMAARAMGSSGRVTACESYLPMVKLMKKVLRLNGMEGRIKVINKRSDELIVGLDIPSRADVLVSEILDSELLGEGLIPTLQHAHDNLLMENPLTVPYRATTYGQLVESTFLWKLHDLHNNEASASDGIRLTPPELDSVLSVKRQQYAMHCDPIGEEIKPLSEPFKIFEFDFWKRPESYGETELCIKATNDGRAHAVVSWWVLQLDREGTIYYSTAPRWISSPTITSPVDWCDHWKQCVWFVPGSGISILKGEGIHLRATHTDTSISYNLDTQVPTTKVLHQGLTTGDLQLVLPPERAAIYGDKGWRLSMLKAIESGLQGRGRSLCLVADDSIFLPLLMANLSEAPHVISLLPGLKERGLHYLQAAACANRLSPNCIEVLEKRVKQLTMHDTHQKKVDLLIAEPFYLGHDSMLPWQNLRFWKDRTTLDYILSEDALIIPSKGILRACAISLPDLWKSRCCVSKIEGFDHSVVNATLGACGHLPELEEGPCLPFFVWQCGEFDVIYLLKIHILCLVRHLM 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4046g00012 632 Gene3D Vaccinia Virus protein VP39 403 552 IPR029063 -
Gabi4046g00012 632 FunFam Protein arginine N-methyltransferase 7 402 552 - -
Gabi4046g00012 632 FunFam Protein arginine N-methyltransferase 1.6 212 396 - -
Gabi4046g00012 632 CDD AdoMet_MTases 103 178 - -
Gabi4046g00012 632 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 76 380 IPR029063 -
Gabi4046g00012 632 Gene3D - 556 616 - -
Gabi4046g00012 632 FunFam Protein arginine N-methyltransferase 69 211 - -
Gabi4046g00012 632 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 41 375 IPR025799 GO:0016274|GO:0018216
Gabi4046g00012 632 Pfam Ribosomal protein L11 methyltransferase (PrmA) 91 183 - -
Gabi4046g00012 632 Gene3D - 212 395 - -
Gabi4046g00012 632 Gene3D Vaccinia Virus protein VP39 69 211 IPR029063 -
Gabi4046g00012 632 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 55 384 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4046g00012 Gabi-Chr4046 176250 181207 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4046g00012 56 216 C2H2 Transcription Factor Family AT3G12270 31.176 1.06e-12 68.9