Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4046g00011 ATGATATCTCTGTTCACCAAAGCCTTAATTGCCACTCGATTCCTTCCCCGAACTCGAACTTGTCCTTCTAAACTAACAGCTATTCAAACCATGAGCTCCCAGTGCATCTTCCAGCTCAAGCTTGACCCACTAACAGGTAACTCTGAATGGGTAGTCATTGAAGAAAACGACAACGAACAAAGCTTTCCCCATAATTTCAACCAACCCCTTCTCGCCACGACGTCGTATTTGGACATGCTCAACGACTCCACCAGAAACAGAGCATTTCGTGAAGCCATAGAGAAAACCATCACCAAACCTTGCCACGTTCTTGATATCGGTGCTGGAACTGGTTTGCTTTCGATGATGGCTGCACGAGCTATGGGCTCTTCTGGAAGGGTCACTGCGTGTGAGTCTTACCTTCCGATGGTGAAGTTGATGAAGAAGGTGCTGCGTCTTAATGGGATGGAGGGAAGAATCAAGGTCATCAACAAGCGCTCTGATGAACTCATTGTTGGCCTTGATATCCCTTCACGTGCAGATGTACTTGTAAGCGAGATTCTAGATTCAGAATTATTAGGTGAGGGGCTTATACCGACCCTACAACATGCGCATGACAATTTGTTGATGGAAAACCCTCTGACTGTGCCATATCGAGCAACTACATATGGACAGCTGGTTGAAAGTACATTCTTATGGAAGCTGCATGATTTGCATAACAATGAGGCTAGTGCATCTGATGGCATTCGTCTTACCCCTCCCGAACTTGATAGTGTTTTGAGTGTCAAACGTCAGCAATATGCCATGCATTGTGATCCAATAGGAGAAGAAATAAAGCCACTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTATGGAGAAACTGAGCTGTGCATAAAGGCAACTAATGATGGTAGAGCTCATGCTGTGGTCTCTTGGTGGGTACTTCAACTTGATCGTGAAGGGACAATCTATTATTCCACTGCCCCTAGGTGGATAAGCTCGCCAACAATTACAAGTCCTGTTGATTGGTGTGACCACTGGAAACAGTGTGTTTGGTTTGTTCCAGGCAGTGGTATTTCCATATTGAAAGGGGAAGGAATTCATTTACGTGCTACTCATACTGACACTAGTATCTCATATAATTTAGATACCCAAGTTCCAACAACTAAGGTTTTGCATCAGGGGCTGACGACTGGAGATTTGCAGCTTGTACTGCCTCCAGAAAGGGCTGCAATCTATGGAGACAAAGGATGGAGGCTTTCAATGTTAAAAGCCATTGAAAGTGGGTTGCAGGGAAGAGGTCGCTCATTATGTTTGGTTGCAGATGATAGTATATTTTTACCGCTTCTTATGGCAAATCTTTCAGAAGCACCACATGTGATATCATTACTTCCGGGGTTGAAGGAAAGGGGCCTCCATTATTTGCAAGCCGCTGCCTGTGCTAATCGTTTGTCACCTAATTGCATTGAAGTTCTTGAAAAAAGGGTGAAACAGTTAACCATGCATGATACACACCAGAAAAAGGTTGATCTGTTAATAGCAGAACCTTTCTATTTGGGACATGATAGCATGCTTCCATGGCAGAACCTACGTTTTTGGAAGGATCGTACTACACTTGATTATATCCTATCTGAAGATGCTCTGATAATTCCTAGTAAAGGAATATTGAGGGCTTGTGCCATCTCTCTCCCTGATCTTTGGAAAAGTCGTTGCTGCGTGAGTAAGATAGAAGGTTTTGACCATTCGGTTGTAAATGCCACATTGGGGGCTTGCGGTCATCTACCTGAATTGGAAGAGGGTCCTTGTCTGCCTTTTTTTGTGTGGCAATGTGGAGAATTTGACGTGCTTAGTGAGACATTTGATGTGATGGAGTTTGATTTCTCAAAAAAAATATGCCAATGTCAAGGAAAATCCCAGGTATTTTGA 1929 0.4344 MISLFTKALIATRFLPRTRTCPSKLTAIQTMSSQCIFQLKLDPLTGNSEWVVIEENDNEQSFPHNFNQPLLATTSYLDMLNDSTRNRAFREAIEKTITKPCHVLDIGAGTGLLSMMAARAMGSSGRVTACESYLPMVKLMKKVLRLNGMEGRIKVINKRSDELIVGLDIPSRADVLVSEILDSELLGEGLIPTLQHAHDNLLMENPLTVPYRATTYGQLVESTFLWKLHDLHNNEASASDGIRLTPPELDSVLSVKRQQYAMHCDPIGEEIKPLSEPFKIFEFDFWKRPESYGETELCIKATNDGRAHAVVSWWVLQLDREGTIYYSTAPRWISSPTITSPVDWCDHWKQCVWFVPGSGISILKGEGIHLRATHTDTSISYNLDTQVPTTKVLHQGLTTGDLQLVLPPERAAIYGDKGWRLSMLKAIESGLQGRGRSLCLVADDSIFLPLLMANLSEAPHVISLLPGLKERGLHYLQAAACANRLSPNCIEVLEKRVKQLTMHDTHQKKVDLLIAEPFYLGHDSMLPWQNLRFWKDRTTLDYILSEDALIIPSKGILRACAISLPDLWKSRCCVSKIEGFDHSVVNATLGACGHLPELEEGPCLPFFVWQCGEFDVLSETFDVMEFDFSKKICQCQGKSQVF 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4046g00011 642 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 390 642 IPR025799 GO:0016274|GO:0018216
Gabi4046g00011 642 Gene3D - 556 642 - -
Gabi4046g00011 642 Gene3D Vaccinia Virus protein VP39 69 211 IPR029063 -
Gabi4046g00011 642 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 76 380 IPR029063 -
Gabi4046g00011 642 FunFam Protein arginine N-methyltransferase 7 402 552 - -
Gabi4046g00011 642 Pfam Ribosomal protein L11 methyltransferase (PrmA) 91 183 - -
Gabi4046g00011 642 CDD AdoMet_MTases 103 178 - -
Gabi4046g00011 642 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 41 375 IPR025799 GO:0016274|GO:0018216
Gabi4046g00011 642 FunFam Protein arginine N-methyltransferase 69 211 - -
Gabi4046g00011 642 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 474 634 IPR029063 -
Gabi4046g00011 642 FunFam Protein arginine N-methyltransferase 1.6 212 396 - -
Gabi4046g00011 642 Gene3D - 212 395 - -
Gabi4046g00011 642 Gene3D Vaccinia Virus protein VP39 403 552 IPR029063 -
Gabi4046g00011 642 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 55 384 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4046g00011 Gabi-Chr4046 176250 181207 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4046g00011 56 216 C2H2 Transcription Factor Family AT3G12270 31.176 7.39e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4046g00011 K11438 - gmx:100785846 1124.38