Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4046g00002 ATGACGATGGTGGGGTTGATGAATGCTGGAATGATAGAAGATGCAGCAATAATTGGAGGGTTGATAGCGGTGCAACTTGTTTACGCGGGGAATGCTGTGTTGTTGAGTTATCTTATGTCTTTAGGCATCAACTCTCTTTCCATTGTTATTTTCACTTCATTTGCTACATTCCTTATTCTCATCCCCTTTGCCCTTTATTATGAAAGGAGTAGATGGCCCAGGAAATTCAGTTTCAAGTTGCTTATACAGATTCTCTTGCTTTCATTTGGAGGGGTAACTTTATTCCAGTCTTTATTCCTTAAAGGAATCAATCTAACCTCGCCAGCAATGGGAACTGCCATGCCAAACCTTGCCCCAGGTCTTATCTTCGTCATCGCGTGGGCTTTTCGGTTAGAAAAAGTCAACTTAAGCTGCACATATAGTAGAGTAAAAATCATTGGCACATTGCTTTGCGTCTTAGGGGCACTCACAATGAGCATAATGCAAAGCATCTCTACTCCTGCACCCACTGAAGAGGGATCAGTTCAATTATCTTCTCCACCACCAAATGTAATGTTTGACAGACAAAAGATAATGGGTTGCCTCTATCTCTTGGCCGCAATCCTCATATTGTCAAGCAACATTGTCCTGCAGGCTTTTACTCTAGGAGCTTTTCCTGCACCGATATCATTGTGTGCAATATCATCCCTTTTCGGAGCGTTCATGACTACAACAGCTCAATTACTTGAAGATCACGAATTCAATACTAGTTGGCCACTTGTGAGCGTTCAAGATATGATTGGCTATTCTCTTCTGGCAGGTGCAGTGAATGGAATATGCCTAAGCTTCAATGGTTGGGCACTTGAGAAGAGAGGGCCAGTCTTGGTTTCCATGTTCAGCCCCGTTGGCACAGTCTGCTCTGTCATTTTCTCGGTTGTTACTCTACGAGACACCATTAATATTGGAAGCTTTGCGGGTATGTTCCTCATGTTCACTGGGCTCTACTTTGTACTTTGGGCCAAAGGGAAAGAAGGCTTCGCACATGGAGGTGGCTTAGAGAGTGAGTTTGATGCAGAGAAGCCTCTATTAAGTTGA 1074 0.4348 MTMVGLMNAGMIEDAAIIGGLIAVQLVYAGNAVLLSYLMSLGINSLSIVIFTSFATFLILIPFALYYERSRWPRKFSFKLLIQILLLSFGGVTLFQSLFLKGINLTSPAMGTAMPNLAPGLIFVIAWAFRLEKVNLSCTYSRVKIIGTLLCVLGALTMSIMQSISTPAPTEEGSVQLSSPPPNVMFDRQKIMGCLYLLAAILILSSNIVLQAFTLGAFPAPISLCAISSLFGAFMTTTAQLLEDHEFNTSWPLVSVQDMIGYSLLAGAVNGICLSFNGWALEKRGPVLVSMFSPVGTVCSVIFSVVTLRDTINIGSFAGMFLMFTGLYFVLWAKGKEGFAHGGGLESEFDAEKPLLS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4046g00002 357 PANTHER WAT1-RELATED PROTEIN 20 337 IPR030184 GO:0016020|GO:0022857
Gabi4046g00002 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
Gabi4046g00002 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 160 - -
Gabi4046g00002 357 Pfam EamA-like transporter family 21 159 IPR000620 GO:0016020
Gabi4046g00002 357 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4046g00002 Gabi-Chr4046 50815 55688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4046g00002 7 348 Nodulin-like Gene Family AT5G47470 57.143 3.26e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4046g00002 - - gmx:100809182 578.17