Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4044g00085 ATGGGTATGGCGGTTCAGGGTTTATCGTGTGCTCAGAGTGAACGCTTCCTTGCACCATGGCGACCTATTCCTTTGCAACGCAAGCCTCTTTTCTGCTCCGTTTTTCTTCCTTCTCGCCCTCGGAACCTCTGCTCTTCAATTGTCGCCGCTTCTTCCAAAAACAAAAACAAGAAAAAATTGTCTCATAATCTTGTTACTGAGGGGGATAACGAGGATGAGGACGCATTTGAGCTGCTCTTCAAGCAACTTGAAGAAGATCTCAAAAACGATGATTTGTCTAAAGGTGATAGCAATGATGATATAACTGAGGAAGACATTGCCATATTTGAACGTGAGTTAGAAGATGCATTGGGAGACTATGATACTGAATTGTTAAACTCGGAAGATATAAACGACACAGAGACTGGTGATGATCCGGAAAATGGTAATGATGATGGAGATGAAAGGTCACTCAAACTTAGGAATTGGCAACTGAAGAAGTTGGCTCAAGCTTTAAAAACTGGCCGTCGTAAAACAAGTATAAAAAATCTTGCTGCTGAGCTTTGTCTTGATAGGGCTCTTGTTCTTGGTTTGCTTCGTGACCCTCCTCCAAATCTTCTAATGATGAGTCTATCATTACCTGATGAACCCACAGAAACAATAACATCACTTGAAACTAAACCTAGAGAGACTGTTCATAAAGAAATAAGTATGGATCGGGTGGATTCTGGACCCAAGTCTAAAGAACCTATTCATACCATGCAACGTAGTTGGTCTGCTCAAAAGAGACTGAAAAAGGCCCAAGTTGACACTCTGGAGAGAGTTTATAGGAGATCAAAACGGCCCACCGATGCAATGATCAGTAGTATCGTGCATGTAACAAACATTCCTCGAAAAAGAGTTGTTAAGTGGTTTGAAGACAAACGCAATGAGGAGGGAGTTCCAGATCGCCGGATTCCTTACCAACGCTCTGTTCCTGAAACTTCTTGA 969 0.4221 MGMAVQGLSCAQSERFLAPWRPIPLQRKPLFCSVFLPSRPRNLCSSIVAASSKNKNKKKLSHNLVTEGDNEDEDAFELLFKQLEEDLKNDDLSKGDSNDDITEEDIAIFERELEDALGDYDTELLNSEDINDTETGDDPENGNDDGDERSLKLRNWQLKKLAQALKTGRRKTSIKNLAAELCLDRALVLGLLRDPPPNLLMMSLSLPDEPTETITSLETKPRETVHKEISMDRVDSGPKSKEPIHTMQRSWSAQKRLKKAQVDTLERVYRRSKRPTDAMISSIVHVTNIPRKRVVKWFEDKRNEEGVPDRRIPYQRSVPETS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4044g00085 322 MobiDBLite consensus disorder prediction 127 149 - -
Gabi4044g00085 322 ProSiteProfiles 'Homeobox' domain profile. 248 308 IPR001356 GO:0003677
Gabi4044g00085 322 MobiDBLite consensus disorder prediction 127 144 - -
Gabi4044g00085 322 CDD homeodomain 251 302 IPR001356 GO:0003677
Gabi4044g00085 322 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 52 315 - -
Gabi4044g00085 322 Gene3D - 248 306 - -
Gabi4044g00085 322 Pfam Homeodomain 255 303 IPR001356 GO:0003677
Gabi4044g00085 322 SMART HOX_1 247 312 IPR001356 GO:0003677
Gabi4044g00085 322 SUPERFAMILY Homeodomain-like 249 310 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4044g00085 Gabi-Chr4044 683604 688237 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gabi4044g00085 Homeodomain 1.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4044g00085 - - ccaj:109796293 442.58