Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4044g00083 ATGGGTATGGCGGTTCAGGGTTTATCGTGTGCTCAGAGTGAACGCTTCCTTGCACCATGGCGACCTATTCCTTTGCAACGCAAGCCTCTTTTCTGCTCCGTTTTTCTTCCTTCTCGCCCTCGGAACCTCTGCTCTTCAATTGTCGCCGCTTCTTCCAAAAACAAAAACAAGGGGGATAACGAGGATGAGGACGCATTTGAGCTGCTCTTCAAGCAACTTGAAGAAGATCTCAAAAACGATGATTTGTCTAAAGGTGATAGCAATGATGATATAACTGAGGAAGACATTGCCATATTTGAACGTGAGTTAGAAGATGCATTGGGAGACTATGATACTGAATTGTTAAACTCGGAAGATATAAACGACACAGAGACTGGTGATGATCCGGAAAATGGTAATGATGATGGAGATGAAAGGTCACTCAAACTTAGGAATTGGCAACTGAAGAAGTTGGCTCAAGCTTTAAAAACTGGCCGTCGTAAAACAAGTATAAAAAATCTTGCTGCTGAGCTTTGTCTTGATAGGGCTCTTGTTCTTGGTTTGCTTCGTGACCCTCCTCCAAATCTTCTAATGATGAGTCTATCATTACCTGATGAACCCACAGAAACAATAACATCACTTGAAACTAAACCTAGAGAGACTGTTCATAAAGAAATAAGTATGGATCGGGTGGATTCTGGACCCAAGTCTAAAGAACCTATTCATACCATGCAACGTAGTTGGTCTGCTCAAAAGAGACTGAAAAAGGCCCAAGTTGACACTCTGGAGAGAGTTTATAGGAGATCAAAACGGCCCACCGATGCAATGATCAGTAGTATCGTGCATGTAACAAACATTCCTCGAAAAAGAGTTGTTAAGTGGTTTGAAGACAAACGCAATGAGGAGGGAGTTCCAGATCGCCGGATTCCTTACCAACGCTCTGTTCCTGAAACTTCTTGA 939 0.4271 MGMAVQGLSCAQSERFLAPWRPIPLQRKPLFCSVFLPSRPRNLCSSIVAASSKNKNKGDNEDEDAFELLFKQLEEDLKNDDLSKGDSNDDITEEDIAIFERELEDALGDYDTELLNSEDINDTETGDDPENGNDDGDERSLKLRNWQLKKLAQALKTGRRKTSIKNLAAELCLDRALVLGLLRDPPPNLLMMSLSLPDEPTETITSLETKPRETVHKEISMDRVDSGPKSKEPIHTMQRSWSAQKRLKKAQVDTLERVYRRSKRPTDAMISSIVHVTNIPRKRVVKWFEDKRNEEGVPDRRIPYQRSVPETS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4044g00083 312 CDD homeodomain 241 292 IPR001356 GO:0003677
Gabi4044g00083 312 SUPERFAMILY Homeodomain-like 239 300 IPR009057 -
Gabi4044g00083 312 MobiDBLite consensus disorder prediction 117 139 - -
Gabi4044g00083 312 Pfam Homeodomain 245 293 IPR001356 GO:0003677
Gabi4044g00083 312 MobiDBLite consensus disorder prediction 117 134 - -
Gabi4044g00083 312 MobiDBLite consensus disorder prediction 220 239 - -
Gabi4044g00083 312 ProSiteProfiles 'Homeobox' domain profile. 238 298 IPR001356 GO:0003677
Gabi4044g00083 312 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 48 305 - -
Gabi4044g00083 312 Gene3D - 238 296 - -
Gabi4044g00083 312 SMART HOX_1 237 302 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4044g00083 Gabi-Chr4044 683603 688237 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gabi4044g00083 Homeodomain 1.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4044g00083 - - ccaj:109796293 439.884