Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4044g00073 ATGGTACAAGCAAAGAAGTTCAGAGGAGTCAGGCAGCGCCAGTGGGGCTCTTGGGTGTCAGAAATTCGCCACCCATTACTGAAGAGAAGGGTGTGGCTAGGCACATTTGAGACAGCAGAGGCTGCAGCAAGGGCATATGATCAAGCAGCCATTTTGATGAATGGTCAGAATGCAAAGACCAATTTCCCAACTTCAAAGAATCAAGCTGAAGATGCCACACCTAATTGTGATGACTCTTTCTTATCTCCCAAGGCTCTTTCAGAGCTCCTCAGCACAAAGCTCAGAAAGTGCTGCAAAGACCCTTCTCCATCTCTCACTTGTCTGAGGCTAGATGCTGACAATTCTCACATTGGGGTGTGGCAAAAAGGAGCAGGACCTCGCTCTGACTCTAATTGGGTCATGAGGGTTGAGCTTGGTAAGAAACAGACAAAGGGTGAGTCCACAGAGTCACCGCATGCTGGTGATAATGCTGTAAATGGGGTAGAAGAAGAAGAAGAAGACAGAGTTGCTATGCAGATGATTGAAGAGCTACTTAATTGGAACTATCCCTGTGGTTCAACTTCAAGTGATTCACAAATGGAAGAAAAAAGGAACCTTCCAACGTCGTAG 609 0.4647 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPTSKNQAEDATPNCDDSFLSPKALSELLSTKLRKCCKDPSPSLTCLRLDADNSHIGVWQKGAGPRSDSNWVMRVELGKKQTKGESTESPHAGDNAVNGVEEEEEDRVAMQMIEELLNWNYPCGSTSSDSQMEEKRNLPTS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4044g00073 202 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Gabi4044g00073 202 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Gabi4044g00073 202 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Gabi4044g00073 202 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Gabi4044g00073 202 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Gabi4044g00073 202 MobiDBLite consensus disorder prediction 140 167 - -
Gabi4044g00073 202 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 151 - -
Gabi4044g00073 202 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Gabi4044g00073 202 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Gabi4044g00073 202 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Gabi4044g00073 202 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4044g00073 Gabi-Chr4044 587926 588815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4044g00073 1 183 AP2-EREBP Transcription Factor Family AT5G25390 62.234 3.45e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gabi4044g00073 AP2 1.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4044g00073 - - lang:109326202 314.309