Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4044g00071 ATGTTGTATTTGCTTCACGGGAGGCTCGATGTGACTATATACGAGGTAAATGCACTACAAACTCTTAATCGGTGCAGTTTCAACCTCTGCAGCAAGGGTACAAGTACTAGAAGAGCGGGGAAGAAATTTCTTTCCCAACTCAAGAGTCATTTGTTGCGCCTATTCCAATGCCAGCCCGAGGTTATTGGGATGAATCTCTATGCAACGGTTGATTTAGATAAGGCAAGGGTTGGTCGGACTAGAATGTTAGAAGAAGGATCCTCCAACCCAAAGTGGAACGAGACCTTTCACATATACTGTGCACATTTGATCTCCCATATTATATTCACTGTGAAACAAGATGACCCTATTGGAGCAACTCTAATAGGAAGAGCTTATGTCCCCGTTGAACAAGTTATGAACGGGAACATAGTGAATACATGGGTCCAGATACTAGATGAGGATCATCGTCCCATACCAGGTGACTCTAAAATCCATGTTCAAATGCAATTCTCTGATGTTAAGAATGACATAAACTGGTCTCGAGGAATAATGATTCCACGGTTTCAAGGAGTTCCCCACACCTTCTTCGGTCAAAAAAATGGTTGCAAAGTTACTTTGTACCAAGATGCTCATGTTCCAGATGGTTCTTTGCCTCGGATCCCAATATATGGAGGAAAACATTATGAGCCTAGGAGATGCTGGGAGGATATTTACAATGCCATTATGGATGCTAAGTACTTGATTTACATAACTGGATGGTCTGTGTATACTGAAATAACATTGATTAGGGACCAAAGTTCAGAAAGAAGAATCACCCTTGGGGAGCTGCTCAAGAAAAAAGCAGATGAAGGTGTTACTGTTCTTATGCTTGTTTGGGATGACAGAACTTCTGTTCCTGAACTGAAGAAAGATGGCTTGATGGCAACCCATGATCAGGAAACTGCAGATTACTTTAGAAACACAAATGTGCATTGTGCTTTGTGCCCACGTAATCCGGATGATGGAAGAAGCATAATTCAGGGTTTTGAAATTTCAACCATGTTCACTCATCACCAAAAGACTATAGTTGTTGACGCTCAAGTTGCTAATGCTATTGGAAGATGGCAGAGGAGAACAGTCGCATGTTTTATAGGTGGGATTGATCTGTGTGATGGGAGATATGATACACAGGAACATCCATTGTTTTCAACTCTGAATACAGTCCATCATGATGATTTCCATCAGCCAAATTTCCCAGGTGCTTCCATTAAGAAAGGTGGTCCAAGAGAGCCATGGCATGACATTCACTGCAAGCTAGAAGGACCTGTTGCATGGGATGTGATGTACAATTTTGAGCAAAGGTGGGAGAAGCAAGTTGGGAAGCAATTACTACTCCCTTCAAGCATGATTGATGACACTCTTGTCCCTCCTTCCACTGTAGCAACAACAAATGAAAACGAGGCTTGGAATGTTCAGTTGTTCAGATCCATTGATGGTGGTGCAGCTTCTGGCTTCCCCCAAGACCCAGAGGAAGCTGCTGAAAGAGGCCTTGTTAGTGGGAAAGATAACATCATCGACAGAAGCATTCAGGATGCTTATATAAATGCTATTCGCCGAGCAAAGAACTTCATCTACATTGAAAATCAGTATTTCCTAGGGAGTTCATATGGTTGGCAAGCATCTGATATTAAAGTTGAAGATATTGGTGCTTTGCATCTTATACCAAAGGAACTTTCATTGAAGATTGTTAGCAAGATTGAAGCAGGACAAAGGTTTTCTGTCTACATTGTCATCCCAATGTGGCCAGAAGGTATACCTGAGAGTGCTTCTGTTCAAGCAATATTAGATTGGCAAAGAAGGACAATGGAGATGATGTATTCTGATATAGCTGAAGCCATAAGGAGAAAGGGAATTAGAGCTCACCCAAGGGATTACTTGACTTTTTTCTGCCTTGGAAATCGTGAGGGTAAGAAAGATAAAGAATATACTCCTACTGAGGCACCAGAGCCTGACAGTGATTATAGTAGAGCACAAAAGTCCAGGAGATTCATGATCTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATTATCATTGGTTCTGCTAACATAAACCAGAGATCAATGGATGGTGCAAGGGACAGTGAGATTGCAATGGGTGCATTCCAACAACGTCATATAACATCAAACGGGACACCCAGAGGACAGATATATGGATTCAGACGTGCATTATGGTATGAGCACATTGGAAATATTAATGATAACGAAGCAAGCATCTTTGACAGTCCAGAAAGCGTGGAGTGCATCAACCTTGTGAATCGTTTTGCTGATACCAACTGGGACTTATACTCAAAGGAAACATTTGATGAATCTAAACCATTTCACCACCTCATGAGCTACCCCATAAAAGTAACCAACAATGGAGCCATAACAACCCTTCCAGGGCTTGAATATTTTCCTGACACCAAGGCTCGGATTACGGGTTCCAAATCAGATTACCTTCCTCCAATTCTCACCACCTAG 2490 0.4177 MLYLLHGRLDVTIYEVNALQTLNRCSFNLCSKGTSTRRAGKKFLSQLKSHLLRLFQCQPEVIGMNLYATVDLDKARVGRTRMLEEGSSNPKWNETFHIYCAHLISHIIFTVKQDDPIGATLIGRAYVPVEQVMNGNIVNTWVQILDEDHRPIPGDSKIHVQMQFSDVKNDINWSRGIMIPRFQGVPHTFFGQKNGCKVTLYQDAHVPDGSLPRIPIYGGKHYEPRRCWEDIYNAIMDAKYLIYITGWSVYTEITLIRDQSSERRITLGELLKKKADEGVTVLMLVWDDRTSVPELKKDGLMATHDQETADYFRNTNVHCALCPRNPDDGRSIIQGFEISTMFTHHQKTIVVDAQVANAIGRWQRRTVACFIGGIDLCDGRYDTQEHPLFSTLNTVHHDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPVAWDVMYNFEQRWEKQVGKQLLLPSSMIDDTLVPPSTVATTNENEAWNVQLFRSIDGGAASGFPQDPEEAAERGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWQASDIKVEDIGALHLIPKELSLKIVSKIEAGQRFSVYIVIPMWPEGIPESASVQAILDWQRRTMEMMYSDIAEAIRRKGIRAHPRDYLTFFCLGNREGKKDKEYTPTEAPEPDSDYSRAQKSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAFQQRHITSNGTPRGQIYGFRRALWYEHIGNINDNEASIFDSPESVECINLVNRFADTNWDLYSKETFDESKPFHHLMSYPIKVTNNGAITTLPGLEYFPDTKARITGSKSDYLPPILTT 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4044g00071 829 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 166 IPR035892 -
Gabi4044g00071 829 Gene3D Endonuclease Chain A 488 714 - -
Gabi4044g00071 829 CDD C2_plant_PLD 1 164 - -
Gabi4044g00071 829 Gene3D Endonuclease Chain A 218 473 - -
Gabi4044g00071 829 PIRSF PLD_plant 1 829 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Gabi4044g00071 829 Pfam C2 domain 7 143 IPR000008 -
Gabi4044g00071 829 SUPERFAMILY Phospholipase D/nuclease 169 453 - -
Gabi4044g00071 829 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 670 697 IPR001736 GO:0003824
Gabi4044g00071 829 SUPERFAMILY Phospholipase D/nuclease 504 741 - -
Gabi4044g00071 829 FunFam Phospholipase D delta 218 460 - -
Gabi4044g00071 829 FunFam Phospholipase D 483 716 - -
Gabi4044g00071 829 PANTHER PHOSPHOLIPASE D 3 817 IPR015679 -
Gabi4044g00071 829 Pfam Phospholipase D C terminal 748 819 IPR024632 -
Gabi4044g00071 829 SMART pld_4 670 697 IPR001736 GO:0003824
Gabi4044g00071 829 SMART pld_4 340 380 IPR001736 GO:0003824
Gabi4044g00071 829 SMART C2_3c 8 141 IPR000008 -
Gabi4044g00071 829 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 340 380 IPR001736 GO:0003824
Gabi4044g00071 829 Pfam Phospholipase D Active site motif 671 697 IPR001736 GO:0003824
Gabi4044g00071 829 Pfam Phospholipase D Active site motif 340 380 IPR001736 GO:0003824
Gabi4044g00071 829 ProSiteProfiles C2 domain profile. 1 142 IPR000008 -
Gabi4044g00071 829 Gene3D C2 domain 6 174 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4044g00071 Gabi-Chr4044 569435 572536 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4044g00071 3 829 Phospholipase D Gene Family (Wang group) AT3G15730 64.551 0.0 1118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4044g00071 K01115 - gmx:100791688 1380.93