Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4044g00058 ATGAGTTCGACTCTCACAAACCATCCTCTGCAGTGCTCAATCGTCACCAATTCAGGCGAGGAGGCCAACCCCGAAATCAATTTTCCCGCCAAATTCCAACGGTCATCTTTCTCAACGGTCAAGTTTCGCGCCGACAAGCCCAACGACCATGCTTCTTCAGCGGTTTCATTTAGCAGGAGGAGAGGGCTAATATGCATAGCCACGTTACCATGTCTTCTTCCCCTAAGTCAGATCATAGGTTGTCTCCGAGCCAACGCGATGCAGCCAGGTACAAAGAAAATATATCTTCTCATTAAAGATGAGGTGAGGAAGGTATTGTCAAAGGGAAAGGCTGCAGGCGTGCTTCGTTTGGTTTTCCACGATGCTGGAACCTTTGAAATCGATGACAATACAGGTGGTATGAATGGTTCTATAGTCTATGAACTTGAAAGACCTGAAAATGCTGGCCTGATAAAATCAGTAAAGGTTCTGCAGAAAGCAAAGACTCAGATAGATGCTATCCAACCAGTATCCTGGGCGGATGTGATTGCTGTGGCTGGAGCTGAAGCAGTTGAAGTATGTGGAGGTCCACCTATCCAAGTTTCACTGGGTAGACTAGATTCGCAGAGGCCTGATCCTGAAGGAAGACTTCCTGAGGAATCTCTCAGTGCTTCTGACTTGAAGAAATGCTTCCAGAGAAAAAGTTTTTCAACGCAAGAACTTGTAGCTTTGTCTGGAGCCCACACTCTTGGAAGTAAAGGTTTTGGAAGCCCAACTTCATTTGACAATTCATATTATAAGATTCTTTTGGAGAAGCCATGGATGTCTTCTGGTGGTATGTCGAGTATGATTGGCCTTCCTTCAGATCACGCACTTGTTGAGGATGATGAATGCTTAAGATGGATTAAAAAATACGCAGACAATGAGAATATGTTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTGAGGTGGAATAGCGTATAA 981 0.4434 MSSTLTNHPLQCSIVTNSGEEANPEINFPAKFQRSSFSTVKFRADKPNDHASSAVSFSRRRGLICIATLPCLLPLSQIIGCLRANAMQPGTKKIYLLIKDEVRKVLSKGKAAGVLRLVFHDAGTFEIDDNTGGMNGSIVYELERPENAGLIKSVKVLQKAKTQIDAIQPVSWADVIAVAGAEAVEVCGGPPIQVSLGRLDSQRPDPEGRLPEESLSASDLKKCFQRKSFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKILLEKPWMSSGGMSSMIGLPSDHALVEDDECLRWIKKYADNENMFFEDFKNAYVKLVNSGVRWNSV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4044g00058 326 ProSiteProfiles Plant heme peroxidase family profile. 111 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 Pfam Peroxidase 100 301 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 PRINTS Plant ascorbate peroxidase signature 188 200 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 PRINTS Plant ascorbate peroxidase signature 209 226 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 PRINTS Plant ascorbate peroxidase signature 111 126 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 PRINTS Plant ascorbate peroxidase signature 297 321 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 PRINTS Plant ascorbate peroxidase signature 129 139 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 PRINTS Plant ascorbate peroxidase signature 227 248 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 PRINTS Plant ascorbate peroxidase signature 169 187 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 SUPERFAMILY Heme-dependent peroxidases 80 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 FunFam Adenylate/guanylate cyclase 211 313 - -
Gabi4044g00058 326 ProSitePatterns Peroxidases active site signature. 111 122 IPR019794 GO:0004601
Gabi4044g00058 326 PRINTS Haem peroxidase superfamily signature 170 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 PRINTS Haem peroxidase superfamily signature 111 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 PRINTS Haem peroxidase superfamily signature 188 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4044g00058 326 FunFam L-ascorbate peroxidase 101 217 - -
Gabi4044g00058 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 233 243 IPR019793 -
Gabi4044g00058 326 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 91 324 IPR044831 GO:0004601|GO:0034599
Gabi4044g00058 326 Gene3D Peroxidase, domain 2 211 313 - -
Gabi4044g00058 326 Gene3D - 99 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4044g00058 Gabi-Chr4044 530617 535389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4044g00058 111 324 Peroxidase AT4G16270 30.935 6.39e-24 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4044g00058 K00434 - gmx:100792735 487.648