Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4038g00004 ATGGCTGATAGGCACCAGTACCCAACAATCGTACAAAAGTTTTCTGGGCAGATTCATTTGAGATCCACCATTTCCCCACATGTTGCAACTTATTATGGAGATTTGAAAGGGCTTGCTCAATTTCAGCAACAGTTTTCATTCAATAATTTTTCAAACGCAGGGTTGCAGTGTCCTGTTATGCCTGCATGCAAAGCTACAAGTAATATGCATTCTGTAGGTTCAGCTGCTTCACCCGTGTTTGTCCAATCCCCATCAGAGAAAAAGAAAGACTTTTCAAGCTTTGCTACTGATTTTCTCATGGGTGGAGTTTCTGCAGCAGTGTCCAAGACTGCAGCTGCTCCAATTGAGCGTGTAAAGCTTCTGATTCAAAATCAGGATGAGATGATTAAGGCTGGTAGGCTATCCGAACCTTACAAGGGCATTGGAGATTGTTTTGGAAGAACAATCAAAGATGAAGGATTTGTTGCATTATATAGAGGGAACACTGCCAATGTTATCCGTTACTTCCCAACACAGGCCCTGAACTTTGCATTTAAAGACTACTTTAAGAGTCTATTTAGCTTCAAGAAAGACAGGGATGGATACTGGAAATGGTTTGCAGGTAACTTAGCATCTGGTGCTGCAGCAGGAGCTTCATCATCAATCTTTGTTTATTCATTGGATTATGCTCGAACCCGCCTTGCCAATGATGCCAAAGCTGGAAAAAAGGGTGGAGAGAGGCAATTCAATGGTTTGGTCGATGTCTACAAGAAAACTCTTAAATCTGATGGTATTGCTGGTCTCTACCGTGGCTTCTACATTTCTTTAGTTGGAATCACTGTCTACCGTGGTTTATACTTTGGAATGTATGATTCTTTGAAGCCAGTGCTCTTGGTCGGAACATTGCACGATAGTTTCTTAGCTAGCTTTGCTCTTGGATGGCTCGTTACTACTGGTTCTAGCGTTGCTTCCTACCCATTTGACACTGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCTGTCAAGTACAAGAGCTCTTTCGATGCATTCTCGCAAATTGTCAAGAATGAAGGTCCTAAATCTCTCTTCAAGGGTGCTGGTGCAAACATCCTTCGAGCAGTCGCAGGTGCTGGTGTGCTTGCGGGATATGACAAACTTCAGGTGCTTATGCTGGGAAAGAAGTATTGA 1170 0.4282 MADRHQYPTIVQKFSGQIHLRSTISPHVATYYGDLKGLAQFQQQFSFNNFSNAGLQCPVMPACKATSNMHSVGSAASPVFVQSPSEKKKDFSSFATDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFVALYRGNTANVIRYFPTQALNFAFKDYFKSLFSFKKDRDGYWKWFAGNLASGAAAGASSSIFVYSLDYARTRLANDAKAGKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFYISLVGITVYRGLYFGMYDSLKPVLLVGTLHDSFLASFALGWLVTTGSSVASYPFDTVRRRMMMTSGEAVKYKSSFDAFSQIVKNEGPKSLFKGAGANILRAVAGAGVLAGYDKLQVLMLGKKY 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4038g00004 389 FunFam ADP,ATP carrier protein, mitochondrial 95 389 - -
Gabi4038g00004 389 SUPERFAMILY Mitochondrial carrier 90 379 IPR023395 -
Gabi4038g00004 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 92 185 IPR018108 -
Gabi4038g00004 389 PRINTS Adenine nucleotide translocator signature 171 183 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi4038g00004 389 PRINTS Adenine nucleotide translocator signature 302 318 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi4038g00004 389 PRINTS Adenine nucleotide translocator signature 197 210 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi4038g00004 389 PRINTS Adenine nucleotide translocator signature 138 159 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi4038g00004 389 PRINTS Adenine nucleotide translocator signature 94 106 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi4038g00004 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 297 383 IPR018108 -
Gabi4038g00004 389 Pfam Mitochondrial carrier protein 196 290 IPR018108 -
Gabi4038g00004 389 Pfam Mitochondrial carrier protein 93 188 IPR018108 -
Gabi4038g00004 389 Pfam Mitochondrial carrier protein 298 385 IPR018108 -
Gabi4038g00004 389 Gene3D Mitochondrial carrier domain 95 389 IPR023395 -
Gabi4038g00004 389 PRINTS Mitochondrial carrier protein signature 97 110 IPR002067 GO:0055085
Gabi4038g00004 389 PRINTS Mitochondrial carrier protein signature 212 230 IPR002067 GO:0055085
Gabi4038g00004 389 PRINTS Mitochondrial carrier protein signature 110 124 IPR002067 GO:0055085
Gabi4038g00004 389 PRINTS Mitochondrial carrier protein signature 262 280 IPR002067 GO:0055085
Gabi4038g00004 389 PRINTS Mitochondrial carrier protein signature 160 180 IPR002067 GO:0055085
Gabi4038g00004 389 PRINTS Mitochondrial carrier protein signature 306 328 IPR002067 GO:0055085
Gabi4038g00004 389 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 79 389 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi4038g00004 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 197 289 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4038g00004 Gabi-Chr4038 54571 57595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4038g00004 1 389 Antiporters AT5G13490 74.103 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4038g00004 K05863 - gmx:100800843 622.854