Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4038g00003 ATGAATAGTTCGGGTTTGGGTGGTGGTTTTTTGTCTGGTCCTGGTGGGGGGATTTTGGACCTGGAATCTCCGTTTCATAGGCACCAACAGACCCAATTAGGTCATCCATCAGTACCTAGTCAACAGCATATGAATATTATGAGTGGTCTGGAAAATGATCACCCAATTGACCTGATTGAAGTGAATGCTGCGATGAATTTGAATAAAGGAAAGGGGATTGTTACTTCTAATCCTGCCAATAGTAATGATTTGAGCGAAGAAGATGAGCCATGCTATGCAGAAGATGGGAATTGCGAGAACTTAGATGGCAGGAAGAGCAAGAAAGGGTCTCCATGGCAGCGAATGAAGTGGACGGACGAAGTGGTTAGGCTTCTTATTGCAGTGGTGAGTTGTGTGGGCGAGGATGGCACAATTGGTGGCATGGATGGTCATAAAAGGAAATACGGGGCTTTACAAAAGAAGGGCAAGTGGAAAACCGTCTCCAAGATAATGATAAGCAAGGGTTGTCATGTCTCGCCACAGCAGTGTGAGGACAAGTTCAATGACTTGAATAAGAGGTACAAGAGGTTGAATGATATACTTGGAAGGGGAACTTGTTGCCAAGTGGTTGAGAATCCTGCACTGATGGATTCCATGCATAACCTGACAGCTAAGGCTAAGGATGATGTTAGAAAGATATTGAGCTCAAAACACTTGTTTTATAAGGAGATGTGTGCCTACCATAATGGGCAAAGGATGTCAAATTGCCATGACCTTGACTTACAGGGTTATGCTCTGGAACTTGGGAGGGACTCAAGAGATAATGATGGCTCTGAGGATGAAGCTGAGGATAACAATGAAAGTGGGGATGATGAGTTGGATAATGAAATTAATATTAATGCACATGGGGATGGAGGGAGGATGCGGGAGCTCCGTGATGGGAATAAATCAAATGAGGAGGATGGCCAATTTTGGCGACAATCTGTTGGGATGGATAACTTTGAGGTTGAAATGGCAAGGGTTTTTCAAGACCCCACGAAGTCATCGTTGGAACGAAGAGAGTGGCTTAAGATACAGATGTTGCAGCTTCAAGAGCAACATGTCAGCTACCAAGCTGAAGCTCTTGAACTTGAGAAACAATGGTTTAAGTGGTTAAGATACCGCAGCAAGAAGGACAGGGAGTTGGAGAGGCTGAGGTTGGAGATTAAGAGAATGAAATTAGAAAATGAGTGCAGAGTTTTGAAACTGAAGCAGAAAGAGCACGAGATAGATTTCAGTATGGCTGAGATGTCCTTAGACCCTGCATCTCTTGGAATCAACAGGCCGCAAGGAAGGGACCACATCAACTTGGGCGGACAGCAGTAG 1344 0.4457 MNSSGLGGGFLSGPGGGILDLESPFHRHQQTQLGHPSVPSQQHMNIMSGLENDHPIDLIEVNAAMNLNKGKGIVTSNPANSNDLSEEDEPCYAEDGNCENLDGRKSKKGSPWQRMKWTDEVVRLLIAVVSCVGEDGTIGGMDGHKRKYGALQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTCCQVVENPALMDSMHNLTAKAKDDVRKILSSKHLFYKEMCAYHNGQRMSNCHDLDLQGYALELGRDSRDNDGSEDEAEDNNESGDDELDNEININAHGDGGRMRELRDGNKSNEEDGQFWRQSVGMDNFEVEMARVFQDPTKSSLERREWLKIQMLQLQEQHVSYQAEALELEKQWFKWLRYRSKKDRELERLRLEIKRMKLENECRVLKLKQKEHEIDFSMAEMSLDPASLGINRPQGRDHINLGGQQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4038g00003 447 MobiDBLite consensus disorder prediction 262 315 - -
Gabi4038g00003 447 Coils Coil 353 373 - -
Gabi4038g00003 447 Coils Coil 381 417 - -
Gabi4038g00003 447 Gene3D - 117 189 - -
Gabi4038g00003 447 MobiDBLite consensus disorder prediction 288 313 - -
Gabi4038g00003 447 Pfam Myb/SANT-like DNA-binding domain 114 239 IPR044822 -
Gabi4038g00003 447 MobiDBLite consensus disorder prediction 270 287 - -
Gabi4038g00003 447 PANTHER F16F4.11 PROTEIN-RELATED 2 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4038g00003 Gabi-Chr4038 50575 52584 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi4038g00003 Myb_DNA-bind_4 1.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4038g00003 - - gmx:100798932 702.975