Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4033g00076 ATGGAAGCACACAGCTCTCAGTATGGGCAAGTTATTGAAATCAGTGGAGATCTTCCTGATGTAGGAAGAGGAAGTAAGATTTGTGGGGAAGCACCATGTGGTTTCGCAGATGCTGGATCCATCTCTAAGGATTCTGAAGAACGATCAACTTCCATGCGAAAGCTTTTGATTGCAGTGGCCCTTTGTGTTATTTTCATGACCGTTGAATTAGTTGGTGGCATCAAAGCTAACAGTCTTGCAATATTGACTGATGCAGCACATTTGCTTTCAGATGTTGCAGCCTTTGCCATCTCCTTATTTTCTTTATGGGCTGCAGGATGGGAAGCTACTCCCCGCCAGTCATATGGATTTTTTAGAATAGAGATTCTTGGTGCTTTGGTTTCTATCCAATTAATATGGTTGCTTGCTGGGATTCTGGTGTATGAAGCCATTGATAGGATCGTTGCTGGTCCTCGAGAGGTGGATGGTTTTTTAATGTTTCTGGTTGCTGCATTTGGTCTTGCGGTTAACATCATCATGGCTGTGTTATTGGGTCATGATCACGGCCATGGACATGGCCACGGCCATGGACATGATCATGGCCATGGATTTTCAGTGTCTACCCATCATGATCATCATCATGATGTAAAGCATACAAAAGATGAGCACCATCACACTCATGATGATCACACACACCATGACGAAAAGCATCCAAAAGATGCACACCATCATTCCCATGAAGATCACGTGCACCATCATGCCCCTGAGGTTACTGAACCACTTCTAGGTGAATCAAAAGATGGATCTGAGAAGAAGAGAAAATGGAACATAAATGTGCAGGGGGCTTATCTCCATGTACTTGGGGACTCTATCCAGAGTGTTGGGGTGATGATCGGGGGAGGAATCATATGGTGGAAGCCTGAATTGCAAATAGTTGATTTAATTTGCACTCTAATCTTTTCAGTAATTGTTTTGGGAACGACTATCAATATGCTGCGAAACATATTGGAAGTCCTGATGGAGAGCACACCACGTGAGATAGATGCTGCCAAGCTTGAAAGGGGGCTATTGGAGATGGAAGAAGTGTTGGCTGTTCATGAGCTGCACATATGGGCCATTACAGTGGGGAAGATATTGCTAGCTTGTCATGTTAAAATCAGACCTGAAGCAGATGCAGACATGGTGCTCAACAAGGTTATAGATTACATTGAAAGGGTTCATAACATCAGTCATGTAACCATACAGATTGAGCGCTGA 1236 0.4369 MEAHSSQYGQVIEISGDLPDVGRGSKICGEAPCGFADAGSISKDSEERSTSMRKLLIAVALCVIFMTVELVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRIVAGPREVDGFLMFLVAAFGLAVNIIMAVLLGHDHGHGHGHGHGHDHGHGFSVSTHHDHHHDVKHTKDEHHHTHDDHTHHDEKHPKDAHHHSHEDHVHHHAPEVTEPLLGESKDGSEKKRKWNINVQGAYLHVLGDSIQSVGVMIGGGIIWWKPELQIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDAAKLERGLLEMEEVLAVHELHIWAITVGKILLACHVKIRPEADADMVLNKVIDYIERVHNISHVTIQIER 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4033g00076 411 NCBIfam cation diffusion facilitator family transporter 52 411 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Gabi4033g00076 411 Pfam Cation efflux family 55 333 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Gabi4033g00076 411 SUPERFAMILY Cation efflux protein transmembrane domain-like 49 334 IPR027469 -
Gabi4033g00076 411 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 24 411 - -
Gabi4033g00076 411 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 339 410 IPR036837 -
Gabi4033g00076 411 Gene3D Cation efflux protein transmembrane domain 51 332 IPR027469 -
Gabi4033g00076 411 MobiDBLite consensus disorder prediction 183 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4033g00076 Gabi-Chr4033 681432 686228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4033g00076 1 411 Inorganic Solute Cotransporters AT2G46800 70.673 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4033g00076 K14689 - gmx:100790458 607.06