Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4033g00073 ATGGCTCCTTCATTAGAAACCAATAGTGGTGAAGCCAAGAACCTTACACATGAAGGAGAACATGTACAAGAAGAAGATGGCATCCTTTTTGCCGTGAACATGATGTCTTCTGTTGTTGTTCCACTAGTAACTCGATCAGCAGTTGAGCTTGGCATCTTTGACATACTAGCCAAAGCAGGTGAAGGTGTGAAGCTCTCTGCAGAGGACATTGCAATTCAAATTAAAGCAAAGAACCCAGAAGCACCCAATATGGTGGATCGTCTTCTTAGGTTGTTGGCAAGTCACTCCATGGTTTCTTGTTCAATTTCTGAAGATCAACAAGGGCTTGCTTCTCCTCAAAGGCTCTATAGTCTCACCCCAATGTCCAAGTATTTTGTGAACGATGCTGATGGTGTGTCATTCGGACCCACCTTGAACTTACCACTGGACAAGATCTTCATGAAAAGTTGGACCGAAATGAAAGGTGCTATCATAGAAGGAGGTATACCATTCAACAGGGTTTATGGTATGAATGCATTTGAGTATCCAGGTGTGGATCCAAGGTTCAATGATGTTTTCAACAGAGCTATGTTCAATTTTACCGCTATAGTTATGAAGAGGGTTCTTGAGTTTTACGAAGGTTTTGAGCAGATAAATACACTGGTGGATGTTGGTGGTGGTCTTGGTATTAATCTCAAGCTCATCACTTCCAAATATCCTCATATCCAAGGTGTTAATTTTGATTTGCCTCATGTTGTGGAGCATGCCCCTACCTATGCTGGGGTGAAACATGAGGGAGGAGATATGTTTGAGAGTGTCCCTAACGGAGACGTCATTTTCATGAAGTGGATACTTCACGATTGGAGTGATGAGCACTGCTTGAAGTTGTTGAAGAATTGCCATAAGGCTATTCCTAATGATGGAAGAGTGATTGTTGTGGACGCAATTCTTCCAGCTTTTCCTGAGAGTACACTTGCTGCTAAGGCTGGTTTCCAAGCTGACATCTTAATGATGGCACAAAACCCAGGAGGGAAAGAACGAACCCAACAAGAGTTCATGGAATTGGCATTAGGATCTGGATTCAGTGGCATCAAATTCGTCTGCTATGTCTCTGGCTTCTGGGTTATGGAGTTCTTTAAGTAG 1122 0.4278 MAPSLETNSGEAKNLTHEGEHVQEEDGILFAVNMMSSVVVPLVTRSAVELGIFDILAKAGEGVKLSAEDIAIQIKAKNPEAPNMVDRLLRLLASHSMVSCSISEDQQGLASPQRLYSLTPMSKYFVNDADGVSFGPTLNLPLDKIFMKSWTEMKGAIIEGGIPFNRVYGMNAFEYPGVDPRFNDVFNRAMFNFTAIVMKRVLEFYEGFEQINTLVDVGGGLGINLKLITSKYPHIQGVNFDLPHVVEHAPTYAGVKHEGGDMFESVPNGDVIFMKWILHDWSDEHCLKLLKNCHKAIPNDGRVIVVDAILPAFPESTLAAKAGFQADILMMAQNPGGKERTQQEFMELALGSGFSGIKFVCYVSGFWVMEFFK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4033g00073 373 PANTHER O-METHYLTRANSFERASE 34 358 IPR016461 GO:0008168
Gabi4033g00073 373 FunFam Caffeic acid O-methyltransferase 126 373 - -
Gabi4033g00073 373 Pfam O-methyltransferase domain 150 355 IPR001077 GO:0008171
Gabi4033g00073 373 PIRSF O-mtase 9 373 IPR016461 GO:0008168
Gabi4033g00073 373 Gene3D - 10 125 IPR036388 -
Gabi4033g00073 373 Pfam Dimerisation domain 45 93 IPR012967 GO:0046983
Gabi4033g00073 373 FunFam Caffeic acid 3-O-methyltransferase 9 125 - -
Gabi4033g00073 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 371 IPR029063 -
Gabi4033g00073 373 SUPERFAMILY "Winged helix" DNA-binding domain 23 128 IPR036390 -
Gabi4033g00073 373 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 373 IPR016461 GO:0008168
Gabi4033g00073 373 Gene3D Vaccinia Virus protein VP39 126 373 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4033g00073 Gabi-Chr4033 649689 651987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4033g00073 21 373 Monolignol Biosynthesis Gene Families AT5G54160 51.404 8.86e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4033g00073 K13066 - gmx:100789402 583.178