Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4033g00072 ATGGGAACTCATCTAGAGTTCAATGGCGTGGAAGCAAAACAGCACCTACAAAGAAAGGGAGAGATAGAAGATGAAGCAGAAAACTACAGCTATGCCATTCAGATGGTGAATTCTATTGCGCTACCCATGTCCTTGCATGCTATATTGGAGCTTGGCGTGTTAGATATAATACAGAAAGCAGGTCCAGATGCTAAGGTCTCAGCCAAGGACATCGCAGCACAAATTTCTTGTAAGAATCCTGATGCACCCACCATGCTAGACAGGATCCTCATGCTCTTGTCCAGTTACTCTGTGCTTCATTGTTCTGTTGTTGATGCTGATGGTGATGATGAAAGTGGTTCTTTTAAGAGATTATACAGTCTGAATTCTGTGTCCAGATATCTTGTGCCCAATCAGGATGGGGTGTCATTGAAGCCTCTCATGGCATTGATTCATGACAAGGTCTTTTTGCAAAACTGGTCCCAATTGAAAGAGGCAATTTTGGAAGGTGGTATACCCTTCAACAGAGTTCATGGCATGCATGCCTTTGAGTATCCGAGCTTCGACCCCAGGTTCAATCAAGTTTTTAATGCAGCAATGAGCAACGCCACGCGCATCGCCGCAAAGAAGATTCTCGAATCCTACAAAGGCTTTGAGCACATCAATAAGGTAGTGGATGTTGGAGGTGGTCTGGGCACTACCCTTAGTTTCGTCGTCTCCAAATACCCTCACATTCAGGGAATAAATTACGACTTGCCTCACGTCATAAAAGAAGCTCCTTCATATCCTGGCGTGACGCATGTGGGAGGGGATATGTTTGAAAGTGTTCCACACGGAGACGCCATAATAATGAAGCTTATACTTCATGATTGGAGTGATGAACGGTGCTTGAAGCTATTGAAGAACTGCTATAATGCTATTCCTGATAATGGGAAGGTCATTATTGTGGAGCAAATCCTTCCCGCAATGCCTGAAAATAGTACCAAGGTGAAGGCTGCATGCCAAACTGATGTTCTTATGATGACTCAAAATCCAGGAGGGAAGGAACGAAGCGAAGAAGAATTCATGGAACTAGCAACTAGATCAGGATTTAGCGGCGTTAGATATGAATGTTTTGCTAATGACCTTAGGGTTATGGAGTTCTTCAAGTAG 1131 0.4385 MGTHLEFNGVEAKQHLQRKGEIEDEAENYSYAIQMVNSIALPMSLHAILELGVLDIIQKAGPDAKVSAKDIAAQISCKNPDAPTMLDRILMLLSSYSVLHCSVVDADGDDESGSFKRLYSLNSVSRYLVPNQDGVSLKPLMALIHDKVFLQNWSQLKEAILEGGIPFNRVHGMHAFEYPSFDPRFNQVFNAAMSNATRIAAKKILESYKGFEHINKVVDVGGGLGTTLSFVVSKYPHIQGINYDLPHVIKEAPSYPGVTHVGGDMFESVPHGDAIIMKLILHDWSDERCLKLLKNCYNAIPDNGKVIIVEQILPAMPENSTKVKAACQTDVLMMTQNPGGKERSEEEFMELATRSGFSGVRYECFANDLRVMEFFK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4033g00072 376 FunFam Caffeic acid 3-O-methyltransferase 10 128 - -
Gabi4033g00072 376 FunFam Caffeic acid O-methyltransferase 129 376 - -
Gabi4033g00072 376 CDD AdoMet_MTases 216 309 - -
Gabi4033g00072 376 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 376 IPR016461 GO:0008168
Gabi4033g00072 376 Pfam O-methyltransferase domain 153 358 IPR001077 GO:0008171
Gabi4033g00072 376 Gene3D Vaccinia Virus protein VP39 130 376 IPR029063 -
Gabi4033g00072 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 373 IPR029063 -
Gabi4033g00072 376 PIRSF O-mtase 10 376 IPR016461 GO:0008168
Gabi4033g00072 376 Pfam Dimerisation domain 43 93 IPR012967 GO:0046983
Gabi4033g00072 376 PANTHER O-METHYLTRANSFERASE 35 361 IPR016461 GO:0008168
Gabi4033g00072 376 Gene3D - 9 128 IPR036388 -
Gabi4033g00072 376 SUPERFAMILY "Winged helix" DNA-binding domain 24 131 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4033g00072 Gabi-Chr4033 619093 623123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4033g00072 9 376 Monolignol Biosynthesis Gene Families AT5G54160 51.902 2.53e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4033g00072 K13066 - tcc:18589884 481.87