Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4033g00069 ATGGACGCATATTCTTGTGGGGAAGAAGTGGTTATTAAGACAAGAAAACCGTATACAATCTCAAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAATAGGTTTCTAGAAGCTTTGAAGCTACATGGGCGAGCATGGCAACGCATAGAAGAGCATATAGGAACAAAGACCGCTGTTCAAATCAGGAGCCATGCACAGAAGTTCTTTACAAAGTTGGAGAAAGAGGCCCTTGTAAAGGGTGTTCCGATCAGACAAGCTGTTGACATAGACATTCCCCCTCCACGGCCCAAAAGAAAACCAAGCAATCCTTACCCTCGGAAGACCAGTGTTGGTAGCGCAACATTACATAGTGGAGCAAAGGATGGAAAACTCAATTCATTTGAATATTCACATGATAAGCAAGCACTGGACTTGGAAAAAGAACCACTTCCAGAGGAGGTACCCTGTTCCTCTGTATCTTCAGCAAACAAGAGTTCAATATCAATGTCAGTGCCACTGGGAAATTCATGCGCCTTAAAGGAGATTACACCTTCAGTGAATGAGGTAATAGCAGATGAAATAAATGAATCTTTTGTCACTATTGAACTTGAAAATCGGAAGTTGGAGATCAATATTGGAAAACAGACTAATAGCACTAGTAAAGACTCCAATTTGGAGAATTCTGATGCCTCACAAGTGACATTGGTTCAAAATGAGAAAACAGGTGGTCTTAATTGCGCATCAACAATAGATAGGACGCAAGGCAATCAGAATTACCCTAGACATGTTACTGTGCACGTTGTTGATGGGAACGGAACAAGTACTCAAAATCCATTCCAAGATATGTTGTTTGGAGACTCCACATTTCAGCCAATAGGAGGGGTTAACGGGCTACCTAATCTTCTCACCAATTCGGATGCATCAAACGCAAGTGAAAGCCAAGGCAACACATCACGATCTTCTATTCATCAATCATTTCTTCCTTATCCTCCCTTAACACAACACAACCAAGATGATTGTCAATCATTTCTTCACATGTCCTCCACATTTTCAAGTCTTGTTGTCTCAACCTTGCTGCAAAATCCAGCAGCCCATGCTGCAGCAAGTTTTGCTGCTTCATTTTGGCCCTATGGAAACCCAGATACTTCAGCAGATTCTCCTAGGTGTTCTCAAGGAGGTTTTCCATCTAGACAAATTGGCTCCCCTCCAAGTCTGGCAGCTATTGCAGCTGCTACTGTAGCTGCTGCAACTGCTTGGTGGGCAGCTCATGGGTTGCTTCCTTTGTGTGCTCCTCTCCATACTGCTTTTGCCTGTCCTCCAGCATCAATGACTGCATTTCCATCAATGAATGCTGGTGAAACACCGGCACTGAATACACACCAAGAAAATATTACACTACAAAATCCTCATATGCAAGATCAGGTACTGGATGCAGAATACTCGGAAGCTCAACAAGCTCAACATCCAGCTTCTAAGTCACCAGCTGTTACTTCATCAGATTCTGAGAATGGAGATGCCAAGTTAAATACTTCATCAAAGGCTACCACTGATCACGAGATGAACAAAGCAATTTCCGAGCACCCTGATTCCAACCAAACGAAGGGCAGGAAACAGGTTGACCGTTCCTCATGTGGTTCCAACACAACCTCTAGCAGCGAAGTGGAGACTGATGCATTAGAGAAGAATGAGAAAGGGAATGAAGAGCTTGAAACACCTGATGCTAGCCATTTAGCTATTGAGTCTAGTAATCGCCGAACTAGAAGTATTAGCAACCTTACCGATTCTTGGAAGGAGGTTTCTGAAGAGGGGAGACTGGCCTTTCAGGCTCTATTCTCCAGAGAGGTGTTGCCTCAAAGCTTTTCACCTCCTAATGATTTGGAAAATAAGGATCATCAAATGGAAGACATCAAAGATAACAAGCAAAACACAGATGACAAAGATGAAGACCTTGACAGCAAGAGAAGCAGTTCTAATTGTGAAGGAATGCATAAAAACATACCATTTGTAGAAAATAACGGGGGACTGCTAACCATAGGGCTTGGACAAGGAAAGCTTATGACTCGTCGAACAGGCTTTAAACCTTACAAAAGATGTTCCGTGGAGGCCAAGGAAAACAGGCTTGGAACGACCAGTAACCAAGGTGAAGAGAAAGGTTCTAAGAGAATACGCTTGGACGGGGAAGCTTCGACTTGA 2172 0.4332 MDAYSCGEEVVIKTRKPYTISKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGVPIRQAVDIDIPPPRPKRKPSNPYPRKTSVGSATLHSGAKDGKLNSFEYSHDKQALDLEKEPLPEEVPCSSVSSANKSSISMSVPLGNSCALKEITPSVNEVIADEINESFVTIELENRKLEINIGKQTNSTSKDSNLENSDASQVTLVQNEKTGGLNCASTIDRTQGNQNYPRHVTVHVVDGNGTSTQNPFQDMLFGDSTFQPIGGVNGLPNLLTNSDASNASESQGNTSRSSIHQSFLPYPPLTQHNQDDCQSFLHMSSTFSSLVVSTLLQNPAAHAAASFAASFWPYGNPDTSADSPRCSQGGFPSRQIGSPPSLAAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPASMTAFPSMNAGETPALNTHQENITLQNPHMQDQVLDAEYSEAQQAQHPASKSPAVTSSDSENGDAKLNTSSKATTDHEMNKAISEHPDSNQTKGRKQVDRSSCGSNTTSSSEVETDALEKNEKGNEELETPDASHLAIESSNRRTRSISNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPNDLENKDHQMEDIKDNKQNTDDKDEDLDSKRSSSNCEGMHKNIPFVENNGGLLTIGLGQGKLMTRRTGFKPYKRCSVEAKENRLGTTSNQGEEKGSKRIRLDGEAST 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4033g00069 723 MobiDBLite consensus disorder prediction 709 723 - -
Gabi4033g00069 723 MobiDBLite consensus disorder prediction 620 651 - -
Gabi4033g00069 723 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Gabi4033g00069 723 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Gabi4033g00069 723 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Gabi4033g00069 723 MobiDBLite consensus disorder prediction 609 658 - -
Gabi4033g00069 723 PANTHER SWI/SNF COMPLEX-RELATED 8 607 - -
Gabi4033g00069 723 SMART sant 23 71 IPR001005 -
Gabi4033g00069 723 MobiDBLite consensus disorder prediction 512 529 - -
Gabi4033g00069 723 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Gabi4033g00069 723 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Gabi4033g00069 723 MobiDBLite consensus disorder prediction 530 548 - -
Gabi4033g00069 723 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Gabi4033g00069 723 MobiDBLite consensus disorder prediction 696 723 - -
Gabi4033g00069 723 Gene3D - 26 73 - -
Gabi4033g00069 723 MobiDBLite consensus disorder prediction 549 567 - -
Gabi4033g00069 723 Coils Coil 619 639 - -
Gabi4033g00069 723 CDD SANT 26 69 IPR001005 -
Gabi4033g00069 723 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Gabi4033g00069 723 MobiDBLite consensus disorder prediction 88 124 - -
Gabi4033g00069 723 MobiDBLite consensus disorder prediction 473 511 - -
Gabi4033g00069 723 MobiDBLite consensus disorder prediction 473 580 - -
Gabi4033g00069 723 MobiDBLite consensus disorder prediction 296 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4033g00069 Gabi-Chr4033 580760 594239 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi4033g00069 Myb_DNA-binding 1.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4033g00069 K12133 - gmx:100101859 1086.63