Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi4033g00062 | ATGGACGCATATTCTTGTGGGGAAGAAGTGGTTATTAAGACAAGAAAACCGTATACAATCTCAAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAATAGGTTTCTAGAAGCTTTGAAGCTACATGGGCGAGCATGGCAACGCATAGAAGAGCATATAGGAACAAAGACCGCTGTTCAAATCAGGAGCCATGCACAGAAGTTCTTTACAAAGTTGGAGAAAGAGGCCCTTGTAAAGGGTGTTCCGATCAGACAAGCTGTTGACATAGACATTCCCCCTCCACGGCCCAAAAGAAAACCAAGCAATCCTTACCCTCGGAAGACCAGTGTTGGTAGCGCAACATTACATAGTGGAGCAAAGGATGGAAAACTCAATTCATTTGAATATTCACATGATAAGCAAGCACTGGACTTGGAAAAAGAACCACTTCCAGAGAAAAATGATTTAGACGAAGGGCCAACAACTTTAAAAGAAAATAAGGATGAGAACCGCTCAAAAGTATTTACTGTTCTCCAGGAGGTACCCTGTTCCTCTGTATCTTCAGCAAACAAGAGTTCAATATCAATGTCAGTGCCACTGGGAAATTCATGCGCCTTAAAGGAGATTACACCTTCAGTGAATGAGGTAATAGCAGATGAAATAAATGAATCTTTTGTCACTATTGAACTTGAAAATCGGAAGTTGGAGATCAATATTGGAAAACAGACTAATAGCACTAGTAAAGACTCCAATTTGGAGAATTCTGATGCCTCACAAGTGACATTGGTTCAAAATGAGAAAACAGGTGGTCTTAATTGCGCATCAACAATAGATAGGACGCAAGGCAATCAGAATTACCCTAGACATGTTACTGTGCACGTTGTTGATGGGAACGGAACAAGTACTCAAAATCCATTCCAAGATATGTTGTTTGGAGACTCCACATTTCAGCCAATAGGAGGGGTTAACGGGCTACCTAATCTTCTCACCAATTCGGATGCATCAAACGCAAGTGAAAGCCAAGGCAACACATCACGATCTTCTATTCATCAATCATTTCTTCCTTATCCTCCCTTAACACAACACAACCAAGATGATTGTCAATCATTTCTTCACATGTCCTCCACATTTTCAAGTCTTGTTGTCTCAACCTTGCTGCAAAATCCAGCAGCCCATGCTGCAGCAAGTTTTGCTGCTTCATTTTGGCCCTATGGAAACCCAGATACTTCAGCAGATTCTCCTAGGTGTTCTCAAGGAGGTTTTCCATCTAGACAAATTGGCTCCCCTCCAAGTCTGGCAGCTATTGCAGCTGCTACTGTAGCTGCTGCAACTGCTTGGTGGGCAGCTCATGGGTTGCTTCCTTTGTGTGCTCCTCTCCATACTGCTTTTGCCTGTCCTCCAGCATCAATGACTGCATTTCCATCAATGAATGCTGGTGAAACACCGGCACTGAATACACACCAAGAAAATATTACACTACAAAATCCTCATATGCAAGATCAGGTACTGGATGCAGAATACTCGGAAGCTCAACAAGCTCAACATCCAGCTTCTAAGTCACCAGCTGTTACTTCATCAGATTCTGAGAATGGAGATGCCAAGTTAAATACTTCATCAAAGGCTACCACTGATCACGAGATGAACAAAGCAATTTCCGAGCACCCTGATTCCAACCAAACGAAGGGCAGGAAACAGGTTGACCGTTCCTCATGTGGTTCCAACACAACCTCTAGCAGCGAAGTGGAGACTGATGCATTAGAGAAGAATGAGAAAGGGAATGAAGAGCTTGAAACACCTGATGCTAGCCATTTAGCTATTGAGTCTAGTAATCGCCGAACTAGAAGTATTAGCAACCTTACCGATTCTTGGAAGGAGGTTTCTGAAGAGGGGAGACTGGCCTTTCAGGCTCTATTCTCCAGAGAGGTGTTGCCTCAAAGCTTTTCACCTCCTAATGATTTGGAAAATAAGGATCATCAAATGGAAGACATCAAAGATAACAAGCAAAACACAGATGACAAAGATGAAGACCTTGACAGCAAGAGAAGCAGTTCTAATTGTGAAGGAATGCATAAAAACATACCATTTGTAGAAAATAACGGGGGACTGCTAACCATAGGGCTTGGACAAGGAAAGCTTATGACTCGTCGAACAGGCTTTAAACCTTACAAAAGATGTTCCGTGGAGGCCAAGGAAAACAGGCTTGGAACGACCAGTAACCAAGGTGAAGAGAAAGGTTCTAAGAGAATACGCTTGGACGGGGAAGCTTCGACTTGA | 2253 | 0.4301 | MDAYSCGEEVVIKTRKPYTISKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGVPIRQAVDIDIPPPRPKRKPSNPYPRKTSVGSATLHSGAKDGKLNSFEYSHDKQALDLEKEPLPEKNDLDEGPTTLKENKDENRSKVFTVLQEVPCSSVSSANKSSISMSVPLGNSCALKEITPSVNEVIADEINESFVTIELENRKLEINIGKQTNSTSKDSNLENSDASQVTLVQNEKTGGLNCASTIDRTQGNQNYPRHVTVHVVDGNGTSTQNPFQDMLFGDSTFQPIGGVNGLPNLLTNSDASNASESQGNTSRSSIHQSFLPYPPLTQHNQDDCQSFLHMSSTFSSLVVSTLLQNPAAHAAASFAASFWPYGNPDTSADSPRCSQGGFPSRQIGSPPSLAAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPASMTAFPSMNAGETPALNTHQENITLQNPHMQDQVLDAEYSEAQQAQHPASKSPAVTSSDSENGDAKLNTSSKATTDHEMNKAISEHPDSNQTKGRKQVDRSSCGSNTTSSSEVETDALEKNEKGNEELETPDASHLAIESSNRRTRSISNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPNDLENKDHQMEDIKDNKQNTDDKDEDLDSKRSSSNCEGMHKNIPFVENNGGLLTIGLGQGKLMTRRTGFKPYKRCSVEAKENRLGTTSNQGEEKGSKRIRLDGEAST | 750 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi4033g00062 | 750 | MobiDBLite | consensus disorder prediction | 125 | 163 | - | - | |
| Gabi4033g00062 | 750 | ProSiteProfiles | SANT domain profile. | 22 | 73 | IPR017884 | - | |
| Gabi4033g00062 | 750 | MobiDBLite | consensus disorder prediction | 88 | 163 | - | - | |
| Gabi4033g00062 | 750 | FunFam | protein REVEILLE 6 isoform X1 | 26 | 74 | - | - | |
| Gabi4033g00062 | 750 | PANTHER | SWI/SNF COMPLEX-RELATED | 8 | 635 | - | - | |
| Gabi4033g00062 | 750 | MobiDBLite | consensus disorder prediction | 723 | 750 | - | - | |
| Gabi4033g00062 | 750 | Pfam | Myb-like DNA-binding domain | 24 | 67 | IPR001005 | - | |
| Gabi4033g00062 | 750 | SMART | sant | 23 | 71 | IPR001005 | - | |
| Gabi4033g00062 | 750 | MobiDBLite | consensus disorder prediction | 647 | 678 | - | - | |
| Gabi4033g00062 | 750 | MobiDBLite | consensus disorder prediction | 636 | 685 | - | - | |
| Gabi4033g00062 | 750 | ProSiteProfiles | Myb-like domain profile. | 19 | 69 | IPR001005 | - | |
| Gabi4033g00062 | 750 | MobiDBLite | consensus disorder prediction | 539 | 556 | - | - | |
| Gabi4033g00062 | 750 | Coils | Coil | 646 | 666 | - | - | |
| Gabi4033g00062 | 750 | MobiDBLite | consensus disorder prediction | 557 | 575 | - | - | |
| Gabi4033g00062 | 750 | CDD | SANT | 26 | 69 | IPR001005 | - | |
| Gabi4033g00062 | 750 | MobiDBLite | consensus disorder prediction | 500 | 607 | - | - | |
| Gabi4033g00062 | 750 | SUPERFAMILY | Homeodomain-like | 18 | 74 | IPR009057 | - | |
| Gabi4033g00062 | 750 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 19 | 73 | IPR017930 | - | |
| Gabi4033g00062 | 750 | MobiDBLite | consensus disorder prediction | 500 | 538 | - | - | |
| Gabi4033g00062 | 750 | MobiDBLite | consensus disorder prediction | 323 | 350 | - | - | |
| Gabi4033g00062 | 750 | MobiDBLite | consensus disorder prediction | 576 | 594 | - | - | |
| Gabi4033g00062 | 750 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 22 | 71 | IPR006447 | GO:0003677 | |
| Gabi4033g00062 | 750 | MobiDBLite | consensus disorder prediction | 736 | 750 | - | - | |
| Gabi4033g00062 | 750 | Gene3D | - | 26 | 73 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gabi4033g00062 | Gabi-Chr4033 | 580760 | 594239 | Dispersed/Tandem |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | MYB-related | Gabi4033g00062 | Myb_DNA-binding | 2e-13 | CL0123 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gabi4033g00062 | K12133 | - | gmx:100101859 | 1142.87 |