Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4033g00058 ATGTTACCTATTGTTGTCATCCTAACTTCTTTTGTTACTGTTAGTTTTGGACTTCTTTTGTTCTTTCCTTTTTCTTGTTCCCTACATGAGCAAGGAAAACTACTGCAACCCCCTTTGCTTCCAAATTCTTGCAATGAAACATGTGGGAAACTCCATGTTCCTTTTCCATTCTATGTTAACACTTCTTGTGTGTCAATTTCTAGTGCTTTCCACCTCTCTTGCTCAAATTCCTCTGCCCTTTTGCTCAAAATTGGCTCAGAAAGTTATCCAGTGTTGGAATTCTTCCCAGATGGTTTGTTAGTGGACTTTCCAGACACATCATCATGTCGCCAGTACAATGACTTGAATTCATTTGGTGAAAGTTTTGAAGGAAATGACTACTTTGGAGTCTCTTTTGACAATGTTATTGGTCTCTATGATTGTGAGGATTCTTCTTTGTGCAAAGCAGATTGTGAAACCATTGACCTTCCTGGTTGTGATGGAAGTGGTGATGGCTCCCTTGGATGCTGCTATCCACTCTCTGACCATAGCATATGGCATATTGGAGAAGGCTTTTCAAAATTTTCTCAGTTTGGATGCAGGGGATTTTCTAGTTGGGCTGTTTTGAGAGGGTCAAATTCAGGAAAACGTGGGGTCAAATTGGAATGGGCTATTCCTAGGAACTCCTCCAAGGAAGTTTGTGCGAGGAGTGCAGACATGGCTAATGCTACATCAATTGAAGGTGGCGTAAGGTGTGTTTGTCAAGATGGATATGTTGGTGATGGGTTTGCTAATGGAACAGGATGCTTGCAGTCCTGTATCAAGAATGGACAGGAAGCATATGGAAGTGACTGCTACATCAAAAGATATGATCAAAGGAAAATGGTTATCATTGCCGGAATTCTTGGTCCAGTTCTTATTGTTGCCTCCTTGGTTGCATTATTTTATCTTCTAAGAAAATCAGAAAAACCAGAAATGTTTGACACTGAGCAGGTTTATTATCACAACATTTCATTCCGCAAAGGTTGTAGAACTCGACTATTCAGCCACCATGAGCTAGAGGAAGCCACCAATGGTTTTGGAGAGGGTCAGAAACTTATGCATGGAAGTAATGGGACAATGTTTGCTGGAGTTCTTGGGGATGGATCTCACATAGCTGTCCACAAGTTAAAATGTGAGAATGAGAAAGACATAGTTCAAGTCCTGTCACAAATTGAGGTTCTATCTACTATTGTACATAGGAACATGGCTTGCCTTATTGGATGCTGTATTGACTCTAGTTACACTCCTCTAGTGGTGTACGAGTATCCTGCAAATGGTACCCTGGAGGAGCATTTACACCAAAGCAAGGGACAAAAACTTAGTTTAGAATGGTATAAGAGATTGACTATTGCTGCAGAAACAGCTAGCATTGTTGCACTATTACATTATGAGAACTCTCCTCCCATATTCCACCATAATCTTAAGTCTAGCTGTATCTTCCTAGATGATGATTTTTCTGTCAAGATTGCAGGATTTGGGCTATTTAGTTCTGATTTTAATTATGATTCTCACTTGCACAAGAACCGTGAATGTTTACCCTTCTGCAGAAATGATGTCTATGACATGGGTGTGGTGCTTCTTGAGATTATCTCAGGCTCAAATCACTTGGACTCACCTACTTTAGCCTTGAAGAAAATACAGGCTGGAAAGCTAGAAGAAATTGTTGATCCTCTTCTTTACTATCATGAGCAACCACACTATCGCCATGAGCAAATACAGATAATAGCAGACCTTGCAACAAGATGCATGCTATTTGGTGCAGATGGAAAGCTAGGAATGATTGATGTTGCAAGGGAGTTAGTACACATGACTAAAGAGAGTCCTGATGGAGGAAACATGAGAGGACCTGCACTGGAGGAGACATTCTCAAATTCAAGCCTTCTTCAAATGATATCAATGTCTCCTGATTCTATGAATGTTCCTTGA 1947 0.4047 MLPIVVILTSFVTVSFGLLLFFPFSCSLHEQGKLLQPPLLPNSCNETCGKLHVPFPFYVNTSCVSISSAFHLSCSNSSALLLKIGSESYPVLEFFPDGLLVDFPDTSSCRQYNDLNSFGESFEGNDYFGVSFDNVIGLYDCEDSSLCKADCETIDLPGCDGSGDGSLGCCYPLSDHSIWHIGEGFSKFSQFGCRGFSSWAVLRGSNSGKRGVKLEWAIPRNSSKEVCARSADMANATSIEGGVRCVCQDGYVGDGFANGTGCLQSCIKNGQEAYGSDCYIKRYDQRKMVIIAGILGPVLIVASLVALFYLLRKSEKPEMFDTEQVYYHNISFRKGCRTRLFSHHELEEATNGFGEGQKLMHGSNGTMFAGVLGDGSHIAVHKLKCENEKDIVQVLSQIEVLSTIVHRNMACLIGCCIDSSYTPLVVYEYPANGTLEEHLHQSKGQKLSLEWYKRLTIAAETASIVALLHYENSPPIFHHNLKSSCIFLDDDFSVKIAGFGLFSSDFNYDSHLHKNRECLPFCRNDVYDMGVVLLEIISGSNHLDSPTLALKKIQAGKLEEIVDPLLYYHEQPHYRHEQIQIIADLATRCMLFGADGKLGMIDVARELVHMTKESPDGGNMRGPALEETFSNSSLLQMISMSPDSMNVP 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4033g00058 648 SUPERFAMILY Protein kinase-like (PK-like) 336 607 IPR011009 -
Gabi4033g00058 648 FunFam probably inactive receptor-like protein kinase At2g46850 325 429 - -
Gabi4033g00058 648 ProSiteProfiles Protein kinase domain profile. 353 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4033g00058 648 FunFam Putative WAK-related receptor-like protein kinase family protein 431 620 - -
Gabi4033g00058 648 Pfam Wall-associated receptor kinase galacturonan-binding 44 94 IPR025287 GO:0030247
Gabi4033g00058 648 Gene3D Transferase(Phosphotransferase) domain 1 431 616 - -
Gabi4033g00058 648 Pfam Protein tyrosine and serine/threonine kinase 356 520 IPR001245 GO:0004672|GO:0006468
Gabi4033g00058 648 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 41 611 IPR045274 GO:0007166
Gabi4033g00058 648 Gene3D Phosphorylase Kinase; domain 1 327 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4033g00058 Gabi-Chr4033 553425 556331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4033g00058 44 607 Receptor kinase-like Gene Family AT2G23450 29.256 8.40e-62 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Gabi4033g00058 PK_Tyr_Ser-Thr 5.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4033g00058 - - gmx:100810557 1010.75