Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4033g00045 ATGGCTTCTGTGTGTGCTTCCTCTGCCATTGCAGCTGTTGCCATCTCCACCCCAAGTTCCCAGAAGAATGGATCACCCTTGGGAACCACAAAAGCTTCTTTTCTTAGTGGGAGGAAACTGAAGGTGAACAACTTTACAGCACCAGTTGGAGGAAGATCCACCACTACTGTGTGTGTAGCAGCTGATCCTGACAGGCCACTGTGGTTCCCAGGAAGCACCCCTCCTCCATGGCTTGATGGCAGTCTTCCTGGAGATTTTGGATTTGATCCTCTAGGTCTTGGATCTGATCCTGAGAGCCTGAGATGGAATGTTCAAGCTGAGCTTGTTCACTGCAGATGGGCAATGTTAGGTGCTGCTGGCATTTTCATCCCAGAATTCCTAACAAAGATTGGTATCCTTAACACCCCTTCATGGTACACTGCTGGAGAGCAGCAATATTTCACAGACACTACAACTCTCTTCATTGTTGAGCTCATTTTCATTGGTTGGGCTGAGGGTAGAAGGTGGGCTGATATCATCAAGCCAGGGTGTGTCAACACTGACCCTATCTTTCCCAACAACAAGCTCACAGGAACTGATGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCACTTGGCTGGGGAAGTGGTTCTCCTGAGAAGATCAAAGAGTTGAGAACAAAGGAGATCAAGAATGGGAGATTGGCCATGTTGGCTGTGATGGGTGCATGGTTCCAGCACATATACACTGGCACTGGTCCTATTGACAACCTCTTTGCTCACCTTGCAGATCCTGGTCATGCTACTATTTTTAAAGCTTTCACTCCAAAGTGA 813 0.4822 MASVCASSAIAAVAISTPSSQKNGSPLGTTKASFLSGRKLKVNNFTAPVGGRSTTTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQQYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFKAFTPK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4033g00045 270 SUPERFAMILY Chlorophyll a-b binding protein 60 268 - -
Gabi4033g00045 270 Pfam Chlorophyll A-B binding protein 74 240 IPR022796 -
Gabi4033g00045 270 Gene3D Chlorophyll a/b binding protein domain 75 260 - -
Gabi4033g00045 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 54 268 IPR001344 GO:0009765|GO:0016020
Gabi4033g00045 270 FunFam Chlorophyll a-b binding protein, chloroplastic 75 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4033g00045 Gabi-Chr4033 442154 443687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4033g00045 46 270 Chloroplast and Mitochondria Gene Families AT3G61470 88.938 4.26e-150 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4033g00045 K08908 - gmx:100802138 531.176