Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4033g00034 ATGGTGGTGGATCCAAGGCTGGTGCTGGTGTTCATCAGCACCTGCATTCTAGCCATCAATGGTGACACAGATCCAAATGATGCTGCTTCTCTAAAGGTTATGTTTCAAAGTATGAACTCACCATCCCAGCTAAATTGGCCTGCAAATGGCGATGATCCTTGTGGACAGTCATGGAAAGGCATTACTTGCTCAGGCAACCGAGTCACAGAGATTAAGTTACCTGGTCTTGGACTGACTGGATCTTTGGGTTACCAGCTACAAGGCTTGACCTCTGTGACAAACCTAGACCTGAGTAACAACAATCTTGGTGGCACCATGCCATACCAACTTCCTCCAAATGTGCAGCACTTAAATCTTGCTAATAATAATTTCAATGGGGCAATTCCTTATTCTCTTTCTGATATGACTTCTCTTGTAGACCTGAATCTTGGTCACAATCAGCTCCAGCAAGGACTGAGTGTCAACTTTCAAAAGCTTTCTTCCCTCTCTACATTGGATCTCTCATTCAATTCCTTGACAGGTGACCTCCCTCAGACTTTGAGCTCACTTTCAAGCATAAACACCATGTATCTGCAAAACAATCAGTTTACAGGCACCATTGATGTCCTTGCTAATCTGCCTCTTGGCAGTCTGAATGTGGAAAACAATCATTTTACTGGCTGGATACCAGAACAGTTGAAAAACATAAACCTACAAAAGGATGGTAATGCGTGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGGACACCTCCTATATCAAAAAGCCCAACTCACAAGTCTGGTGGACATAGCACCTCATCAGATGGAGGCACAAGTGATGGAGGCAAAAAATCTGGTATAGGAGGCGGTGGCGTTGCTGGAATAGTGATCTCCATCTTGGTTGTTGCGGCAATAGTAGCATTCTTTCTGGTGAAGAGAAGATCCAAGAAGTCATTTTCAGATAGGGAAAAGCTTGACAATCAGCCCTTGGCTCCTCTTACTTCAAACGAAGTGCATGAAATGAATTCCATGCAAACTTCGTCTGTAATTGACATGAAGACATTTGATACTTCTGCGGCCACAATAAGTCTTAAACCCCCACCTTTTGATCGTCATAAATCATTTGATGAGGATGAGTTTTCAAAGAAGCCCACTATTGTGAAGAAGACCATAACAGCTCCTGCAAATGTAAAATCATATTCTATTGCCGACCTGCAGATTGCTACCGGAAGCTTCAGTGTGGATCAACTACTTGGTGAGGGGTCTTTTGGACGTGTTTACCGTGCTCAATTTGATGATGGAAAGGTTCTTGCCTTGAAGAAGATAGATTCATCTGTCCTTCCCAATAATTTGTCTGAAGATTTTGTAGAAATAGTTTCGAACATCTCCCATTTGCATCATCCCAATGTGACAGAGCTTGTAGGTTATTGTTCAGAACATGGACAACACCTCCTAGTCTATGAGTTTCATAAAAACGGATCACTGCATGACTTTCTTCACCTACCAGATGACTATAGTAAACCATTGATATGGAATTCACGTGTCAAGATTGCTTTGGGTATTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCACCATCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTGCTTGATACAGATCTTAATCCTCATCTTTCAGGCAGTGGATTGGCAAGCTATATTCCAAATGCAAACCAGGTATTGAACAATAATGCTGGATCCGGATATGATGCTCCCGAAGTAGGCTTGTCTGGTCAATATACTCTTAAGAGTGATGTCTACAGCTTTGGAGTTGTAATGTTGGAACTTCTTAGTGGACGGAAGCCATTTGATAGCTCAAGGCCAAGACTTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCATTGGAAGGGTTATACCCTGTTAAGTCTCTTTCTCGATTTGCTGATGTAATTGCTCTCTGTGTTCAGCCGGAGCCAGAATTCCGACCACCTATGTCAGAGGTGGTTCAAGCATTGGTTCGATTAGTGCAGAGAGCTAACATGAGCAAGAGGACATTTGGAACTGAACAAGGAGGAACCCCAAGAGGGGGTATGGAGTCAGAAACACAAGACATGTAA 2136 0.4316 MVVDPRLVLVFISTCILAINGDTDPNDAASLKVMFQSMNSPSQLNWPANGDDPCGQSWKGITCSGNRVTEIKLPGLGLTGSLGYQLQGLTSVTNLDLSNNNLGGTMPYQLPPNVQHLNLANNNFNGAIPYSLSDMTSLVDLNLGHNQLQQGLSVNFQKLSSLSTLDLSFNSLTGDLPQTLSSLSSINTMYLQNNQFTGTIDVLANLPLGSLNVENNHFTGWIPEQLKNINLQKDGNAWSSGPAPPPPPGTPPISKSPTHKSGGHSTSSDGGTSDGGKKSGIGGGGVAGIVISILVVAAIVAFFLVKRRSKKSFSDREKLDNQPLAPLTSNEVHEMNSMQTSSVIDMKTFDTSAATISLKPPPFDRHKSFDEDEFSKKPTIVKKTITAPANVKSYSIADLQIATGSFSVDQLLGEGSFGRVYRAQFDDGKVLALKKIDSSVLPNNLSEDFVEIVSNISHLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLPDDYSKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKSANILLDTDLNPHLSGSGLASYIPNANQVLNNNAGSGYDAPEVGLSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGTEQGGTPRGGMESETQDM 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4033g00034 711 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Gabi4033g00034 711 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 484 692 - -
Gabi4033g00034 711 SUPERFAMILY L domain-like 24 228 - -
Gabi4033g00034 711 SUPERFAMILY Protein kinase-like (PK-like) 388 678 IPR011009 -
Gabi4033g00034 711 ProSitePatterns Protein kinases ATP-binding region signature. 412 434 IPR017441 GO:0005524
Gabi4033g00034 711 MobiDBLite consensus disorder prediction 233 279 - -
Gabi4033g00034 711 MobiDBLite consensus disorder prediction 690 711 - -
Gabi4033g00034 711 Gene3D Phosphorylase Kinase; domain 1 368 483 - -
Gabi4033g00034 711 MobiDBLite consensus disorder prediction 255 274 - -
Gabi4033g00034 711 PRINTS Leucine-rich repeat signature 92 105 - -
Gabi4033g00034 711 PRINTS Leucine-rich repeat signature 159 172 - -
Gabi4033g00034 711 Gene3D Ribonuclease Inhibitor 24 246 IPR032675 -
Gabi4033g00034 711 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 370 483 - -
Gabi4033g00034 711 Gene3D Transferase(Phosphotransferase) domain 1 485 697 - -
Gabi4033g00034 711 Pfam Protein tyrosine and serine/threonine kinase 408 678 IPR001245 GO:0004672|GO:0006468
Gabi4033g00034 711 MobiDBLite consensus disorder prediction 240 254 - -
Gabi4033g00034 711 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 24 249 - -
Gabi4033g00034 711 MobiDBLite consensus disorder prediction 314 335 - -
Gabi4033g00034 711 Pfam Leucine rich repeat 91 148 IPR001611 GO:0005515
Gabi4033g00034 711 ProSiteProfiles Protein kinase domain profile. 406 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4033g00034 711 PANTHER LEUCINE RICH REPEAT KINASE 2 66 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4033g00034 Gabi-Chr4033 286881 295800 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4033g00034 8 710 Strubbelig Receptor Gene Family AT1G53730 66.806 0.0 881
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gabi4033g00034 PK_Tyr_Ser-Thr 6.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4033g00034 - - gmx:100780323 1153.66