Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4033g00033 ATGGTGGTGGATCCAAGGCTGGTGCTGGTGTTCATCAGCACCTGCATTCTAGCCATCAATGGTGACACAGATCCAAATGATGCTGCTTCTCTAAAGGTTATGTTTCAAAGTATGAACTCACCATCCCAGCTAAATTGGCCTGCAAATGGCGATGATCCTTGTGGACAGTCATGGAAAGGCATTACTTGCTCAGGCAACCGAGTCACAGAGATTAAGTTACCTGGTCTTGGACTGACTGGATCTTTGGGTTACCAGCTACAAGGCTTGACCTCTGTGACAAACCTAGACCTGAGTAACAACAATCTTGGTGGCACCATGCCATACCAACTTCCTCCAAATGTGCAGCACTTAAATCTTGCTAATAATAATTTCAATGGGGCAATTCCTTATTCTCTTTCTGATATGACTTCTCTTGTAGACCTGAATCTTGGTCACAATCAGCTCCAGCAAGGACTGAGTGTCAACTTTCAAAAGCTTTCTTCCCTCTCTACATTGGATCTCTCATTCAATTCCTTGACAGGTGACCTCCCTCAGACTTTGAGCTCACTTTCAAGCATAAACACCATGTATCTGCAAAACAATCAGTTTACAGGCACCATTGATGTCCTTGCTAATCTGCCTCTTGGCAGTCTGAATGTGGAAAACAATCATTTTACTGGCTGGATACCAGAACAGTTGAAAAACATAAACCTACAAAAGGATGGTAATGCGTGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGGACACCTCCTATATCAAAAAGCCCAACTCACAAGTCTGGTGGACATAGCACCTCATCAGATGGAGGCACAAGTGATGGAGGCAAAAAATCTGGTATAGGAGGCGGTGGCGTTGCTGGAATAGTGATCTCCATCTTGGTTGTTGCGGCAATAGTAGCATTCTTTCTGGTGAAGAGAAGATCCAAGAAGTCATTTTCAGATAGGGAAAAGCTTGACAATCAGCCCTTGGCTCCTCTTACTTCAAACGAAGTGCATGAAATGAATTCCATGCAAACTTCGTCTGTAATTGACATGAAGACATTTGATACTTCTGCGGCCACAATAAGTCTTAAACCCCCACCTTTTGATCGTCATAAATCATTTGATGAGGATGAGTTTTCAAAGAAGCCCACTATTGTGAAGAAGACCATAACAGCTCCTGCAAATGTAAAATCATATTCTATTGCCGACCTGCAGATTGCTACCGGAAGCTTCAGTGTGGATCAACTACTTGGTGAGGGGTCTTTTGGACGTGTTTACCGTGCTCAATTTGATGATGGAAAGGTTCTTGCCTTGAAGAAGATAGATTCATCTGTCCTTCCCAATAATTTGTCTGAAGATTTTGTAGAAATAGTTTCGAACATCTCCCATTTGCATCATCCCAATGTGACAGAGCTTGTAGATGACTATAGTAAACCATTGATATGGAATTCACGTGTCAAGATTGCTTTGGGTATTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCACCATCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTGCTTGATACAGATCTTAATCCTCATCTTTCAGGCAGTGGATTGGCAAGCTATATTCCAAATGCAAACCAGGTATTGAACAATAATGCTGGATCCGGATATGATGCTCCCGAAGTAGGCTTGTCTGGTCAATATACTCTTAAGAGTGATGTCTACAGCTTTGGAGTTGTAATGTTGGAACTTCTTAGTGGACGGAAGCCATTTGATAGCTCAAGGCCAAGACTTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCATTGGAAGGGTTATACCCTGTTAAGTCTCTTTCTCGATTTGCTGATGTAATTGCTCTCTGTGTTCAGCCGGAGCCAGAATTCCGACCACCTATGTCAGAGGTGGTTCAAGCATTGGTTCGATTAGTGCAGAGAGCTAACATGAGCAAGAGGACATTTGGAACTGAACAAGGAGGAACCCCAAGAGGGGGTATGGAGTCAGAAACACAAGACATGTAA 2052 0.4327 MVVDPRLVLVFISTCILAINGDTDPNDAASLKVMFQSMNSPSQLNWPANGDDPCGQSWKGITCSGNRVTEIKLPGLGLTGSLGYQLQGLTSVTNLDLSNNNLGGTMPYQLPPNVQHLNLANNNFNGAIPYSLSDMTSLVDLNLGHNQLQQGLSVNFQKLSSLSTLDLSFNSLTGDLPQTLSSLSSINTMYLQNNQFTGTIDVLANLPLGSLNVENNHFTGWIPEQLKNINLQKDGNAWSSGPAPPPPPGTPPISKSPTHKSGGHSTSSDGGTSDGGKKSGIGGGGVAGIVISILVVAAIVAFFLVKRRSKKSFSDREKLDNQPLAPLTSNEVHEMNSMQTSSVIDMKTFDTSAATISLKPPPFDRHKSFDEDEFSKKPTIVKKTITAPANVKSYSIADLQIATGSFSVDQLLGEGSFGRVYRAQFDDGKVLALKKIDSSVLPNNLSEDFVEIVSNISHLHHPNVTELVDDYSKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKSANILLDTDLNPHLSGSGLASYIPNANQVLNNNAGSGYDAPEVGLSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGTEQGGTPRGGMESETQDM 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4033g00033 683 ProSiteProfiles Protein kinase domain profile. 406 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4033g00033 683 PRINTS Leucine-rich repeat signature 159 172 - -
Gabi4033g00033 683 PRINTS Leucine-rich repeat signature 92 105 - -
Gabi4033g00033 683 SUPERFAMILY L domain-like 24 228 - -
Gabi4033g00033 683 MobiDBLite consensus disorder prediction 240 254 - -
Gabi4033g00033 683 Gene3D Transferase(Phosphotransferase) domain 1 468 671 - -
Gabi4033g00033 683 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 468 IPR046959 -
Gabi4033g00033 683 Pfam Leucine rich repeat 91 148 IPR001611 GO:0005515
Gabi4033g00033 683 MobiDBLite consensus disorder prediction 314 335 - -
Gabi4033g00033 683 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 370 471 - -
Gabi4033g00033 683 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Gabi4033g00033 683 Gene3D Ribonuclease Inhibitor 176 240 IPR032675 -
Gabi4033g00033 683 ProSitePatterns Protein kinases ATP-binding region signature. 412 434 IPR017441 GO:0005524
Gabi4033g00033 683 Gene3D Ribonuclease Inhibitor 26 175 IPR032675 -
Gabi4033g00033 683 MobiDBLite consensus disorder prediction 233 279 - -
Gabi4033g00033 683 SUPERFAMILY Protein kinase-like (PK-like) 388 650 IPR011009 -
Gabi4033g00033 683 Pfam Protein kinase domain 482 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4033g00033 683 MobiDBLite consensus disorder prediction 662 683 - -
Gabi4033g00033 683 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 24 249 - -
Gabi4033g00033 683 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 457 664 - -
Gabi4033g00033 683 Gene3D Phosphorylase Kinase; domain 1 368 467 - -
Gabi4033g00033 683 MobiDBLite consensus disorder prediction 255 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4033g00033 Gabi-Chr4033 286881 295800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4033g00033 6 663 Strubbelig Receptor Gene Family AT3G14350 66.519 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gabi4033g00033 Pkinase 7.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4033g00033 - - gmx:100780323 1075.46