Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4033g00008 ATGGAGAAGGCCAATATATCGGCGTATTACGAGACGAGGGCGGCGCACTTTGGCGTAGTGAGCAGCGAGTGGCTGGCTCAGGCTGAGTCTGCCACCGGCCACGGCCACAGCCACAACAACCCACCAGACACCATTTCCGGCGATGATATTGATAAGCCTTTCTCCGTCATCGAGGAGTTCAACGCGTGGCGGAAGCATCCCGATTTGGCGGAGGCGGTGGCCGCCATTCGCGCATTGGCCGCCGTCATTAGCAGCAGCAAGGCGACAACAATGATGCAGCTGGAGATCGAGCTCAAGAAGGCCTCCGATTCCCTTAAATCGTGGGATACAACCTCTATCTCTTTGACAGCAGGCTGTGATCTGTTTATGCGATATGTGACTAGGACTTCTGCTTTAGAATATGAAGACTTCAATTCAGCAAAGTCTCGCTTGATTGAACGTGCTGAGAAGTTTGGGGAAATCTCATACAAGGCTCGCAAAATTATTGCAATGCTGAGTCAAGATTTTATAGTTGATGGTTGCACAATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTACAAGTCCTAAAACTGGCTGCACAAAATAAGAAACTATTTCGGGTCTTCTGCACAGAGGGGAGACCAGACCGAACGGGTTTAAGGTTGTCCAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAAATTGTAATAGACTCTGCAGTGGCATATACTATGGATGAGGTGGACATGGTATTTGTTGGGGCAGATGGAGTTGTTGAAAGTGGTGGTATAATCAACATGATGGGGACTTACCAAATTGCATTGGTTGCAAAGAGTATGAATAAGCCAGTTTATGTAGCTGCTGAAAGCTACAAGTTTGCTCGTCTTTACCCTCTTGACCAAAAGGATTTGGCCCCTGCCTTACGCCCAGTTGATTTTGGTGTACCTATTCCATCCAAGGTTGAGGTTGAATGTTCTGCCAGGGATTATACTCCTCCTCAATATCTAACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCAGTTGTTAGTGATGAGCTCATCCAGCTATACTTATAG 1062 0.4689 MEKANISAYYETRAAHFGVVSSEWLAQAESATGHGHSHNNPPDTISGDDIDKPFSVIEEFNAWRKHPDLAEAVAAIRALAAVISSSKATTMMQLEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKIIAMLSQDFIVDGCTILVHGFSRVVLQVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKIVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAKSMNKPVYVAAESYKFARLYPLDQKDLAPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4033g00008 353 Gene3D - 52 154 IPR042528 -
Gabi4033g00008 353 Pfam Initiation factor 2 subunit family 67 341 IPR000649 GO:0044237
Gabi4033g00008 353 FunFam Translation initiation factor eIF-2B subunit alpha 157 353 - -
Gabi4033g00008 353 SUPERFAMILY NagB/RpiA/CoA transferase-like 66 352 IPR037171 -
Gabi4033g00008 353 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 18 353 - -
Gabi4033g00008 353 FunFam Translation initiation factor eIF-2B subunit alpha 52 154 - -
Gabi4033g00008 353 Gene3D - 157 353 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4033g00008 Gabi-Chr4033 61080 63594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4033g00008 6 353 Eukaryotic Initiation Factors Gene Family AT1G53880 82.184 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4033g00008 K03239 - gmx:102669842 594.349