Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4025g00005 ATGCTGAAGCGCGCCGGCCGCCAGGAGTCTCTCTCCGACAAGATCTACAGGTTCCGAGGGACTCTGCTGGTGGTCTTGATCCCTCTCGTTCTCATCACTTTCGTCCTCTACATGATGCCATCGAGCACCTCCAACGAGTCAGTTGGAGACTTCGCCCTCGTTAATCGGAAAATGTCCCCCGATAAGAAATCCGGTAGCTCCTTCGCCGTTATCTTCGACGCCGGCAGCTCCGGAAGTCGTGTGCACGTCTTCCACTTCGACCAGAACCTAGATCTCGTTCACATTGGCAAAGATCTCGAGCTTTTCGTGCAGCTTAAGCCGGGTTTGAGTGCGTACGCTCAGAATCCGCAGCAGGCAGCAGAATCTCTGATTTCGCTTTTAGATAAAGCGGAGAGTGTTGTTCCTCGTGAATTGCGATCCAAGACACCCGTTCGAGTTGGTGCAACTGCGGGTTTGAGGGCTTTGGAAGGGGATGCATCTGATAGGATCTTGCAAGCGGTAAGGGATTTGCTTAAGCAAAGAAGCACCCTGAAATCTGAGCCTGATGCGGTCACGGTGCTGGATGGAACACAAGAAGGTGCTTTTCAATGGGTTACTATTAACTATCTATTGGGAAACTTGGGAAAAGATTACTCAAAGACTGTTGGGGTAGTTGATCTTGGAGGAGGATCTGTTCAAATGGCTTATGCCATCTCTGAGGCAGATGCGGCCATGGCTCCCAAAGTACCAGATGGAGGGGACCCATATGTCAAGGAGATGTTCCTGAGGGGAAGGAAATACTACCTATATGTTCACAGTTACTTGCACTATGGTTTACTAGCAGCCCGTGCAGAAATTTTAAAGGTTTCTGGTGATGCAGAAAACCCTTGTATCTTATCTGGCTATGATGACTCTTACAAATATGGAGGAAAGTCGTTTAAGGCTAAATCCTCTCCTTCTGGGTCAAGCTTGAATGAATGCAAAAGCGTAGCTCATAATGCTCTCAGAGTTAATGAGTCAACATGTACACACATGAAGTGCACTTTTGGTGGGATTTGGAATGGTGGAGGGGGAGATGGACAGAAAAACCTTTTTGTTGCCTCGTTTTTCTTTGACCGTGCTGCTGAGGCTGGTTTTGCTGATCCAAACTCACCCGTTGCGATTGTTCGACCTGCGGATTTTGAGGATGCAGCTAAGCAAGCTTGTCAAACAAAACTTGTGAATGCCAAATCCACTTATCCACATGTTGATGAAGGGAACCTTCCATATATTTGCATGGATCTTGTATACCAGTATACATTGCTTGTTGATGGATTTGGCATATATCCATGGCAAGAGATTACATTAGTGAAGAAAGTTAAATATGATGATGCCCTTGTTGAGGCAGCATGGCCCCTAGGCAGCGCCATAGAAGCTGTCTCATCTACGTAA 1410 0.4723 MLKRAGRQESLSDKIYRFRGTLLVVLIPLVLITFVLYMMPSSTSNESVGDFALVNRKMSPDKKSGSSFAVIFDAGSSGSRVHVFHFDQNLDLVHIGKDLELFVQLKPGLSAYAQNPQQAAESLISLLDKAESVVPRELRSKTPVRVGATAGLRALEGDASDRILQAVRDLLKQRSTLKSEPDAVTVLDGTQEGAFQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAISEADAAMAPKVPDGGDPYVKEMFLRGRKYYLYVHSYLHYGLLAARAEILKVSGDAENPCILSGYDDSYKYGGKSFKAKSSPSGSSLNECKSVAHNALRVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNSPVAIVRPADFEDAAKQACQTKLVNAKSTYPHVDEGNLPYICMDLVYQYTLLVDGFGIYPWQEITLVKKVKYDDALVEAAWPLGSAIEAVSST 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4025g00005 469 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 11 468 IPR000407 GO:0016787
Gabi4025g00005 469 Pfam GDA1/CD39 (nucleoside phosphatase) family 64 468 IPR000407 GO:0016787
Gabi4025g00005 469 FunFam Apyrase 1 188 447 - -
Gabi4025g00005 469 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 187 202 IPR000407 GO:0016787
Gabi4025g00005 469 CDD NBD_sugar-kinase_HSP70_actin 70 229 - -
Gabi4025g00005 469 Gene3D - 68 463 - -
Gabi4025g00005 469 Gene3D Exopolyphosphatase. Domain 2 188 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4025g00005 Gabi-Chr4025 57437 64220 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4025g00005 3 468 Calmodulin-binding Proteins AT3G04080 70.450 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4025g00005 K14641 - gmx:100786073 827.009