Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4025g00001 ATGGATTATCTAATTCTGGTCACTCTTCTATTCTGGTTGATGTTATCAACTGCAAGTTCTTCTTCCCTGTATCATGGGAAGGGGAATTACTACCTTCTCAACCATCGTAAAATGTCCCCCAATTATCTCAATCAGAAAGTCATCAACGAATCCTATGCGGCAATCTTCGATGCTGGAAGTACAGGAAGTCGTGTACATGTCTACCGTTTCAACAAGCACTTACATCTCCTCCATATTGGGGAAGATCTTGAGCTTTATGTTAAGACTAAACCAGGTTTGAGTGCATACGCTGAGAATCCACAAGAAGCCGCAGATTCTCTAACTCCCCTTTTAGAGGAAGCAGAAAGTGTTGTTCCTGAAGAGTTGCATCCCAGGACACCCGTTAAACTTGGAGCAACAGCAGGTTTGAGGACATTGAAAGGGGATGCTGCTGACAGGATCTTGGAGGCGGTTAGGAATATGTTCAAGAACAGAAGCACACTGAATGTTGAATCAAATGCAGTTTCGGTGTTGAGTGGAACCCAAGAAGGAGCATATATGTGGGTGACTATTAACTATCTATTGGGAAACTTGGGAAAGCATTATTCAAATACTTCAGCAATACTTGATCTTGGAGGTGGGTCTGTTCAAATGGCTTATGCAGTCTCAGAGAAAGATGCTGCAAAGGCTCCAAAAGTGCCTGAGGGAACGGATCCATACATAACGGAGTTGTTCCTCAAGGGAAAGAAATATTATCTCTATGTTCACAGTTACTTGCGCTTTGGATTACTAGCAGCTCGTGCAGAGATTTTAAAGGTTACAGATGGTTCTGAAAACCCTTGTATTTTAGAGGGCTTTGATGGGTATTACAAATATGGAGGAGTGGAGTATAAGGCCTCAGCTCCCCATTCTGGCTCAAGCTTCAGCAAATGCAAACAAGTAGTTCTTGAGGCTCTCAATGTTAATGGGACATGTTCATATAAAAAATGCACTTTCGGTGGGATATGGAATGGTGGAGGGGGAAATGGAGAAAACAACTTTTTTGTTGCATCGTTTTTCTTTGAACTAGCTGATGAGGCTGGTTTTGTTGATCCAAACGCACCCAATGCCATAGTTCGTCCTGTGGATTTTGAGAATGCAGCAAAGCTAGCTTGCGAGACAGAACTAAAAGATGCCAAATCCACTTTTCCTCGTCTTAAGGATGGAGACACTCCCTATATATGCATGGATCTTGTATACCAATATACATTACTCGTTGATGCATTTGGCATTGATCCCTGGCAGGAGATTACGTTGGTGAGACAAATTCAGTATCAGGATTCTCTTGTGGAAGCAGCATGGCCCCTAGGTAGTGCCATTGAAGCCGTATCATCATTACCTAAATTTGAGAAATTAATGTACTTCATTTAA 1389 0.4219 MDYLILVTLLFWLMLSTASSSSLYHGKGNYYLLNHRKMSPNYLNQKVINESYAAIFDAGSTGSRVHVYRFNKHLHLLHIGEDLELYVKTKPGLSAYAENPQEAADSLTPLLEEAESVVPEELHPRTPVKLGATAGLRTLKGDAADRILEAVRNMFKNRSTLNVESNAVSVLSGTQEGAYMWVTINYLLGNLGKHYSNTSAILDLGGGSVQMAYAVSEKDAAKAPKVPEGTDPYITELFLKGKKYYLYVHSYLRFGLLAARAEILKVTDGSENPCILEGFDGYYKYGGVEYKASAPHSGSSFSKCKQVVLEALNVNGTCSYKKCTFGGIWNGGGGNGENNFFVASFFFELADEAGFVDPNAPNAIVRPVDFENAAKLACETELKDAKSTFPRLKDGDTPYICMDLVYQYTLLVDAFGIDPWQEITLVRQIQYQDSLVEAAWPLGSAIEAVSSLPKFEKLMYFI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4025g00001 462 Pfam GDA1/CD39 (nucleoside phosphatase) family 49 454 IPR000407 GO:0016787
Gabi4025g00001 462 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 5 453 IPR000407 GO:0016787
Gabi4025g00001 462 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 171 186 IPR000407 GO:0016787
Gabi4025g00001 462 Gene3D Exopolyphosphatase. Domain 2 172 430 - -
Gabi4025g00001 462 CDD NBD_sugar-kinase_HSP70_actin 54 213 - -
Gabi4025g00001 462 Gene3D - 52 446 - -
Gabi4025g00001 462 FunFam Apyrase 1 172 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4025g00001 Gabi-Chr4025 24194 29006 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4025g00001 50 451 Calmodulin-binding Proteins AT3G04080 61.290 4.17e-175 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4025g00001 K14641 - gmx:100787491 716.072