Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4024g00052 ATGAGAGATATAAGGAAAGTAGTGCATGGGTTGAAGCCAGCCCTCTTGATGTTGGCGGTGCAGATTGTAATTGCTACGGCGACTGTGCTCTACAAGCTTGCCTTAAACGATGGAATGAGCATTAGAGTAGTTACTGCTTACCGTCTCATTTTTGCTGCAGCATGCACTGTTCCACTTCCTCTTATTTTTGAAAGGGAGAACAGATCAAAGCTGACTTGGAGGGTGGTTTTTATGTCATTCTTTTGTGGCCTATTCGGGGGAACTATATTCCAAAACTTTTACTACGAGTCCTTGAAATTGATATCAGCAACATTTGCTTCCGCCGTTTATAATCTCATTCCTGCCATCACTTTTATCTTGGCTGCCACCTGCGGTTTCGAAAGATTAAATTTGAAAACGGTAGCAGGCAAGACTAAGGTGTTAGGAACAATAGCAGGAGTTGGCGGGACAATGATGCTGACCTTTCTCAAAGGTGTAGAAATTAACATTTGGACTTTCCACATTAACCTTTTGCATAAAAATGGCCACACAGGATCACAAAATGGTGACTCTGGTAGTAAATTGCTTGGTATTTTTTTTGGTCTTGGAAGCTCCTTCTCTTATGCATTATGGCTCATCATTCAGGCTAAGATGAGCAAAGAGTTCCCAAGCCATCTCTCGAGTACAGCTTTGATGAACTTAACGGGGGCAATACAATCTACTGTTTTTGCCCTTTGTGTTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAATATTAGGCTTCTCACAGCAGCATTTTCGGGTATTGTGGCCTCTGGAATAATGGTTATTGTCATTGCATGGTGTGTCAGGATGAGAGGCCCACTGTATGCCTCTGTTTTTAACCCTCTTGTGCTTGTGCTTGTTGCCGTTGCTGGTCCCTTAATGTTGGATGAGAACCTATACATAGGAAGTGTAATTGGAGCGGTGCTAATTGTGATTGGATTGTACATGGTGTTGTGGGGTAAGAGCAAAGAAATGAAAAAGGTGACTCATTTAGAAATAATTCCAGGAATTGATCAAGAAATTGAGGTTGTTGTCACATCCACGACCGTAGATAATGATAAAAGTAACTGCAGCAGCAGCAGCCACCATTCCTGTATTGAGGGCAATATTGATTGCAAGGATCATGATAATTCATCAAAAGTTGAACACGAAGTACAAGACACCATGGATAACTGA 1203 0.4206 MRDIRKVVHGLKPALLMLAVQIVIATATVLYKLALNDGMSIRVVTAYRLIFAAACTVPLPLIFERENRSKLTWRVVFMSFFCGLFGGTIFQNFYYESLKLISATFASAVYNLIPAITFILAATCGFERLNLKTVAGKTKVLGTIAGVGGTMMLTFLKGVEINIWTFHINLLHKNGHTGSQNGDSGSKLLGIFFGLGSSFSYALWLIIQAKMSKEFPSHLSSTALMNLTGAIQSTVFALCVEKDWSQWRLGWNIRLLTAAFSGIVASGIMVIVIAWCVRMRGPLYASVFNPLVLVLVAVAGPLMLDENLYIGSVIGAVLIVIGLYMVLWGKSKEMKKVTHLEIIPGIDQEIEVVVTSTTVDNDKSNCSSSSHHSCIEGNIDCKDHDNSSKVEHEVQDTMDN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4024g00052 400 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Gabi4024g00052 400 Pfam EamA-like transporter family 12 137 IPR000620 GO:0016020
Gabi4024g00052 400 PANTHER WAT1-RELATED PROTEIN 12 339 IPR030184 GO:0016020|GO:0022857
Gabi4024g00052 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 142 - -
Gabi4024g00052 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4024g00052 Gabi-Chr4024 618572 620873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4024g00052 11 341 Nodulin-like Gene Family AT1G25270 40.896 2.32e-90 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4024g00052 - - gmx:100798755 479.944