Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4024g00051 ATGACAGATATAAGGAAAGTAATGCATGGGTTGAAGCCAGCCCTCTTGATGGTGGTGGTGCAGATTGTAATTGCTACGGCGACTGTGCTCTACAAGCTTGCCATAAACGATGGAATGAGCATTAGAGTAGTTACTGCTTACCGTCTCATTTTTGCTGCAGCATGCACTGTTCCACTTCCTCTTATTTTTGAAAGGAAGAACAGACCAAAGCTGACTTGGAGGGTGGTTTTTATGTCATTCTTTTGTGGCCTATTTGGGGGAACTTTATTCCAAAACCTTTACTACGAGTCCTTGAAATTGATTTCAGCAACATTTGCTTCTGCTGTTTATAATCTCATTCCTGCCGTCACTTTTATCTTGGCTGCCGCCTGCGGTTTCGAAAGATTGAATTTGCAAACGGTAGCAGGCAAGATTAAGGTGTTAGGAACGATAACAGGAGTTGGCGGGGCAATGATGCTGACCTTTCTTAAAGGTGTAGAAATTAACATTTGGACCTTCCACATTAACCTTTTGCATAAAAATGACCAAACAGGAACACTAAATGGTGACTCTGGAAGTAAATTGCTTGGTATTTTTTGTGGTCTTGGAAGCTCCTTCTGTTTTGCATTATGGCTCATCATTCAGGCTAAGATGAGCAAAGAATTCCCAAGCCATCTCTCGAGTACAGCTTTGATGAACTTAATGGGGGCAATACAATCTACTGCTTTTGCCCTTTGTGTTGAGAAGGACTGGAGCCAATGGAGGTTGGGTTGGAATATTAGGCTTCTCACGGCAGCATTTTCGGGTATTTTGGCCTCTGGAATAATGGTTATTGTCATTGCATGGTGTGTCAGGATGAGAGGCCCACTGTATACATCCGTTTTCAACCCTCTTGTGCTTGTGCTTGTTGCCATTGCTGGTTCCTTAATGTTGGATGAGAACCTATACTTAGGAAGTGTAATTGGAGCGGTGCTAATTATGATTGGATTGTACATGGTGCTGTGGGGTAAGAGCAAAGAAATGAAAAAGGTGACTGACTTAGAAATCACTCCAGGAATTGAAGAAATTGAGGTTGTTGTCACGTCCACAACCATAGATAATGATGAGAGTAACAACAGCAGCAATAACCACTCCTATATTGAGGGCAATATTATTTGCAAGGATCATGATAATTCGTCTAAAACTGAACACGAAGTACAAGACATCAAAGAAGAAATAGCTAACAAGGACATAGAATCATAA 1221 0.4144 MTDIRKVMHGLKPALLMVVVQIVIATATVLYKLAINDGMSIRVVTAYRLIFAAACTVPLPLIFERKNRPKLTWRVVFMSFFCGLFGGTLFQNLYYESLKLISATFASAVYNLIPAVTFILAAACGFERLNLQTVAGKIKVLGTITGVGGAMMLTFLKGVEINIWTFHINLLHKNDQTGTLNGDSGSKLLGIFCGLGSSFCFALWLIIQAKMSKEFPSHLSSTALMNLMGAIQSTAFALCVEKDWSQWRLGWNIRLLTAAFSGILASGIMVIVIAWCVRMRGPLYTSVFNPLVLVLVAIAGSLMLDENLYLGSVIGAVLIMIGLYMVLWGKSKEMKKVTDLEITPGIEEIEVVVTSTTIDNDESNNSSNNHSYIEGNIICKDHDNSSKTEHEVQDIKEEIANKDIES 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4024g00051 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 332 - -
Gabi4024g00051 406 PANTHER WAT1-RELATED PROTEIN 12 339 IPR030184 GO:0016020|GO:0022857
Gabi4024g00051 406 Pfam EamA-like transporter family 12 141 IPR000620 GO:0016020
Gabi4024g00051 406 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Gabi4024g00051 406 MobiDBLite consensus disorder prediction 382 406 - -
Gabi4024g00051 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4024g00051 Gabi-Chr4024 606920 608803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4024g00051 11 383 Nodulin-like Gene Family AT1G25270 39.142 6.97e-92 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4024g00051 - - gmx:100798755 493.812